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基于生物信息学鉴定乳腺癌中奥拉帕尼耐药的关键基因:预后意义及治疗相关性

Bioinformatics-based identification of key genes for Olaparib resistance in breast cancer: prognostic implications and therapeutic relevance.

作者信息

Shen Kezhen, Li Xiaozhe, Zhao Sihan, Zhang Xinyu, Yu Le, Li Jun, Cai Lei

机构信息

Xiangya School of Medicine, Central South University, No. 138 Tongzipo Road, Yuelu District, Changsha, 410000, Hunan Province, China.

Department of Breast and Thyroid Surgery, Third Xiangya Hospital, Central South University, No. 138 Tongzipo Road, Yuelu District, Changsha, 410000, Hunan Province, China.

出版信息

Discov Oncol. 2025 Jun 18;16(1):1144. doi: 10.1007/s12672-025-02989-z.

Abstract

Breast cancer is the most common malignancy among women worldwide, with drug therapy playing a crucial role in its treatment. In recent years, poly ADP-ribose polymerase (PARP) inhibitors, such as Olaparib, have shown significant efficacy in the management of BReast CAncer gene (BRCA)-mutated breast cancers. However, the emergence of resistance has become a major clinical challenge, limiting their long-term effectiveness. This in-silico study aimed to identify key genes associated with Olaparib resistance through comprehensive bioinformatics analysis. Differential expression and drug sensitivity prediction were performed to identify resistance-associated genes, followed by pathway enrichment and protein-protein interaction (PPI) network construction. Kaplan-Meier survival analysis and Cox regression were conducted to evaluate the prognostic value of candidate genes. Four immune-related genes-CD19, CXCL9, ICOS, and CXCL13-were identified as being closely associated with Olaparib resistance and relapse-free survival. Additionally, comparative drug sensitivity analysis revealed that high-risk subgroups may exhibit differential response patterns to specific chemotherapeutic agents. These findings provide a theoretical framework for understanding the molecular basis of Olaparib resistance in breast cancer and offer insights for future experimental and translational research.

摘要

乳腺癌是全球女性中最常见的恶性肿瘤,药物治疗在其治疗中起着关键作用。近年来,聚ADP核糖聚合酶(PARP)抑制剂,如奥拉帕利,在治疗携带乳腺癌易感基因(BRCA)突变的乳腺癌方面已显示出显著疗效。然而,耐药性的出现已成为一项重大临床挑战,限制了它们的长期有效性。这项计算机模拟研究旨在通过全面的生物信息学分析,识别与奥拉帕利耐药相关的关键基因。进行差异表达和药物敏感性预测以识别耐药相关基因,随后进行通路富集和蛋白质-蛋白质相互作用(PPI)网络构建。进行Kaplan-Meier生存分析和Cox回归以评估候选基因的预后价值。四个免疫相关基因——CD19、CXCL9、ICOS和CXCL13——被确定与奥拉帕利耐药和无复发生存密切相关。此外,比较药物敏感性分析显示,高危亚组可能对特定化疗药物表现出不同的反应模式。这些发现为理解乳腺癌中奥拉帕利耐药的分子基础提供了理论框架,并为未来的实验和转化研究提供了见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7c10/12177118/61500dd9a19e/12672_2025_2989_Fig1_HTML.jpg

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