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卵巢癌诊断与预后中的因果推断:现状与未来方向

Causal inference in the diagnosis and prognosis of ovarian cancer: current state and future directions.

作者信息

Zhan Feng, He Lidan, Qin Shilong, Guo Yina

机构信息

School of Electronic Information Engineering, Taiyuan University of Science and Technology, Taiyuan, 030024, Shanxi, China.

College of Engineering, Fujian Jiangxia University, Fuzhou, 350108, Fujian, China.

出版信息

Clin Transl Oncol. 2025 Jun 19. doi: 10.1007/s12094-025-03967-1.

DOI:10.1007/s12094-025-03967-1
PMID:40537725
Abstract

Ovarian cancer represents one of the most lethal gynecologic malignancies, characterized by low early detection rates and challenging prognostic assessment. Conventional diagnostic modalities demonstrate limited sensitivity and specificity for early-stage disease identification. Recent research has begun to explore causal inference methodologies as complementary approaches that may enhance diagnostic precision and prognostic capability. This systematic review evaluates the current state and future prospects of causal inference methodologies in enhancing ovarian cancer diagnosis and prognosis. We performed a comprehensive systematic review focusing on causal inference methodologies applied to ovarian cancer research. The analysis encompassed biomarker identification, pathogenic mechanism elucidation, and multimodal data integration. Additionally, we analyzed the synergistic combination of causal inference with machine learning approaches across genomic, transcriptomic, proteomic, and imaging datasets. Causal inference methods have shown effectiveness in identifying crucial biomarkers and revealing underlying pathogenic mechanisms of ovarian cancer. The integration of machine learning with causal inference has enhanced model interpretability, clinical applicability, and diagnostic-prognostic accuracy. These approaches have achieved improved predictions of disease progression and optimization of treatment strategies by leveraging clinical, genetic, and imaging data. Causal inference shows considerable potential in advancing precision medicine for ovarian cancer, offering robust frameworks for addressing confounding factors and establishing causal relationships. As these methodologies evolve and data volumes expand, their application may become increasingly valuable in oncology practice.

摘要

卵巢癌是最致命的妇科恶性肿瘤之一,其特点是早期检测率低且预后评估具有挑战性。传统的诊断方法对早期疾病识别的敏感性和特异性有限。最近的研究已开始探索因果推断方法作为补充手段,以提高诊断准确性和预后能力。本系统评价评估了因果推断方法在增强卵巢癌诊断和预后方面的现状和未来前景。我们进行了一项全面的系统评价,重点关注应用于卵巢癌研究的因果推断方法。分析涵盖了生物标志物识别、致病机制阐明和多模态数据整合。此外,我们分析了因果推断与机器学习方法在基因组、转录组、蛋白质组和成像数据集方面的协同结合。因果推断方法在识别关键生物标志物和揭示卵巢癌潜在致病机制方面已显示出有效性。机器学习与因果推断的整合提高了模型的可解释性、临床适用性以及诊断和预后准确性。这些方法通过利用临床、遗传和成像数据,在疾病进展预测和治疗策略优化方面取得了进展。因果推断在推进卵巢癌精准医学方面显示出巨大潜力,为解决混杂因素和建立因果关系提供了有力框架。随着这些方法的不断发展和数据量的增加,它们在肿瘤学实践中的应用可能会变得越来越有价值。

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本文引用的文献

1
Deciphering ovarian cancer heterogeneity through spatial transcriptomics, single-cell profiling, and copy number variations.通过空间转录组学、单细胞分析和拷贝数变异来解析卵巢癌的异质性。
PLoS One. 2025 Mar 4;20(3):e0317115. doi: 10.1371/journal.pone.0317115. eCollection 2025.
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Causal relationship between inflammatory factors and gynecological cancer: a Bayesian Mendelian randomization study.炎症因子与妇科癌症之间的因果关系:一项贝叶斯孟德尔随机化研究。
Sci Rep. 2024 Dec 2;14(1):29868. doi: 10.1038/s41598-024-80747-x.
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Integrating muti-omics data to identify tissue-specific DNA methylation biomarkers for cancer risk.
整合多组学数据以鉴定用于癌症风险的组织特异性 DNA 甲基化生物标志物。
Nat Commun. 2024 Jul 18;15(1):6071. doi: 10.1038/s41467-024-50404-y.
4
The role of immune cell signatures in the pathogenesis of ovarian-related diseases: a causal inference based on Mendelian randomization.免疫细胞特征在卵巢相关疾病发病机制中的作用:基于孟德尔随机化的因果推断
Int J Surg. 2024 Oct 1;110(10):6541-6550. doi: 10.1097/JS9.0000000000001814.
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Impact of insomnia on ovarian cancer risk and survival: a Mendelian randomization study.失眠对卵巢癌风险和生存的影响:一项孟德尔随机化研究。
EBioMedicine. 2024 Jun;104:105175. doi: 10.1016/j.ebiom.2024.105175. Epub 2024 Jun 1.
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A novel defined programmed cell death related gene signature for predicting the prognosis of serous ovarian cancer.一个新型的定义程序性细胞死亡相关基因特征可预测浆液性卵巢癌的预后。
J Ovarian Res. 2024 Apr 29;17(1):92. doi: 10.1186/s13048-024-01419-y.
7
A randomized controlled trial to compare short-term outcomes following infragastric and infracolic omentectomy at the time of primary debulking surgery for epithelial ovarian cancer with normal-appearing omentum.一项比较原发性肿瘤减灭术时经胃网膜下和网膜下切除正常外观大网膜对上皮性卵巢癌近期结局影响的随机对照研究。
J Ovarian Res. 2024 Apr 19;17(1):85. doi: 10.1186/s13048-024-01401-8.
8
Causal machine learning for predicting treatment outcomes.因果机器学习在预测治疗结果中的应用。
Nat Med. 2024 Apr;30(4):958-968. doi: 10.1038/s41591-024-02902-1. Epub 2024 Apr 19.
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Directed acyclic graphs in clinical research.有向无环图在临床研究中的应用。
Eur J Endocrinol. 2024 Mar 30;190(4):E5-E7. doi: 10.1093/ejendo/lvae032.
10
Estimating the impact of bias in causal epidemiological studies: the case of health outcomes following assisted reproduction.估算因果流行病学研究中偏倚的影响:辅助生殖后健康结果的案例。
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