核苷酸代谢的综合多组学分析:阐明尿苷激酶2(UCK2)在膀胱癌中的作用及预后意义。
Comprehensive multi-omics analysis of nucleotide metabolism: elucidating the role and prognostic significance of UCK2 in bladder cancer.
作者信息
Guo Yadong, Lin Ziyou, Zhang Wentao, Chen Haotian, Chen Yuxin, Liu Yongqiang, Shan Zezhi, Mao Shiyu, Yao Xudong
机构信息
Department of Urology, Shanghai Tenth People's Hospital, School of Medicine, Tongji University, Shanghai, 200072, China.
Urologic Cancer Institute, Tongji University School of Medicine, Shanghai, 200092, China.
出版信息
Funct Integr Genomics. 2025 Jun 21;25(1):133. doi: 10.1007/s10142-025-01642-w.
Nucleotide metabolism reprogramming is a hallmark of cancer, yet its systematic investigation remains limited. Here, we performed a comprehensive multi-omics analysis of key nucleotide metabolism genes across various cancer types using TCGA, GTEx, and other public datasets. Uridine-cytidine kinase 2 (UCK2), a key enzyme in the pyrimidine salvage pathway, was identified as consistently upregulated and genomically amplified, particularly in bladder cancer (BLCA). High UCK2 expression in BLCA correlated with poor prognosis, advanced tumor stage, high-grade histology, and strong diagnostic performance (AUC = 0.932). Single-cell and spatial transcriptomic analyses revealed that UCK2 is predominantly expressed in malignant and stromal cells. Functional enrichment analysis linked UCK2 to cell cycle progression, DNA repair, tumor invasion, and immune modulation. UCK2 expression was associated with immune cell recruitment and activation, as well as the expression of immune-related factors, including antigen presentation molecules and immune checkpoints. Higher UCK2 expression also showed a strong correlation with immunotherapy response in anti-PD-L1-treated cohorts. Drug sensitivity profiling indicated that UCK2 expression correlates with increased sensitivity to chemotherapeutic agents, such as cisplatin, docetaxel, and gemcitabine. In vitro, CRISPR-Cas9-mediated knockdown of UCK2 significantly inhibited BLCA cell proliferation, migration, and clonogenicity, while suppressing activation of the PI3K/AKT/mTOR signaling pathway. Collectively, our findings identify UCK2 as a key regulator of tumor progression, metabolic remodeling, and immune interaction in BLCA, highlighting its potential as a diagnostic biomarker and therapeutic target.
核苷酸代谢重编程是癌症的一个标志,但其系统性研究仍然有限。在此,我们使用TCGA、GTEx和其他公共数据集,对多种癌症类型中的关键核苷酸代谢基因进行了全面的多组学分析。尿苷-胞苷激酶2(UCK2)是嘧啶补救途径中的一种关键酶,被确定为持续上调且在基因组上扩增,特别是在膀胱癌(BLCA)中。BLCA中UCK2的高表达与预后不良、肿瘤分期进展、高级别组织学以及强大的诊断性能相关(AUC = 0.932)。单细胞和空间转录组分析表明,UCK2主要在恶性细胞和基质细胞中表达。功能富集分析将UCK2与细胞周期进程、DNA修复、肿瘤侵袭和免疫调节联系起来。UCK2表达与免疫细胞募集和激活以及免疫相关因子的表达有关,包括抗原呈递分子和免疫检查点。在抗PD-L1治疗的队列中,较高的UCK2表达也与免疫治疗反应密切相关。药物敏感性分析表明,UCK2表达与对顺铂、多西他赛和吉西他滨等化疗药物的敏感性增加相关。在体外,CRISPR-Cas9介导的UCK2敲低显著抑制了BLCA细胞的增殖、迁移和克隆形成能力,同时抑制了PI3K/AKT/mTOR信号通路的激活。总体而言,我们的研究结果确定UCK2是BLCA中肿瘤进展、代谢重塑和免疫相互作用的关键调节因子,突出了其作为诊断生物标志物和治疗靶点的潜力。