• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

地中海交替单胞菌蔗糖磷酸化酶的晶体结构显示活性位点存在环转变。

Crystal structure of the sucrose phosphorylase from Alteromonas mediterranea shows a loop transition in the active site.

作者信息

Fredslund Folmer, Goux Marine, Offmann Bernard, Demonceaux Marie, André-Miral Corinne, Welner Ditte, Teze David

机构信息

DTU Biosustain, Technical University of Denmark, Kongens Lyngby, Hovedstaden, Denmark.

US2B, UMR CNRS 6286, University of Nantes, 44322 Nantes, France.

出版信息

Acta Crystallogr F Struct Biol Commun. 2025 Jul 1;81(Pt 7):306-310. doi: 10.1107/S2053230X25004327. Epub 2025 Jun 23.

DOI:10.1107/S2053230X25004327
PMID:40548353
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12210189/
Abstract

Sucrose phosphorylases are essential enzymes regulating sucrose metabolism, and it has been shown that a loop rearrangement is essential to their catalytic cycle. Crystal structures of only six sucrose phosphorylase enzymes are available. Here, we present the crystal structure of a sucrose phosphorylase from a proteobacterium, Alteromonas mediterranea, at 2.15 Å resolution. The available sucrose phosphorylase structures have shown that an important conformational change occurs during the catalytic cycle or upon mutagenesis. Interestingly, our data present clear indications of the two major conformations in the same crystal.

摘要

蔗糖磷酸化酶是调节蔗糖代谢的关键酶,研究表明环重排对其催化循环至关重要。目前仅有六种蔗糖磷酸化酶的晶体结构。在此,我们展示了来自地中海交替单胞菌(Alteromonas mediterranea)的一种蔗糖磷酸化酶的晶体结构,分辨率为2.15 Å。已有的蔗糖磷酸化酶结构表明,在催化循环或诱变过程中会发生重要的构象变化。有趣的是,我们的数据清楚地显示了同一晶体中的两种主要构象。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/922a/12210189/3f26a6be55c5/f-81-00306-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/922a/12210189/6711d588a8fa/f-81-00306-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/922a/12210189/ab7799208d1c/f-81-00306-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/922a/12210189/3f26a6be55c5/f-81-00306-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/922a/12210189/6711d588a8fa/f-81-00306-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/922a/12210189/ab7799208d1c/f-81-00306-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/922a/12210189/3f26a6be55c5/f-81-00306-fig3.jpg

相似文献

1
Crystal structure of the sucrose phosphorylase from Alteromonas mediterranea shows a loop transition in the active site.地中海交替单胞菌蔗糖磷酸化酶的晶体结构显示活性位点存在环转变。
Acta Crystallogr F Struct Biol Commun. 2025 Jul 1;81(Pt 7):306-310. doi: 10.1107/S2053230X25004327. Epub 2025 Jun 23.
2
The structure of a family 168 glycoside hydrolase from the marine bacterium Muricauda eckloniae.来自海洋细菌海带缪氏菌的家族168糖苷水解酶的结构。
Acta Crystallogr F Struct Biol Commun. 2025 Jul 1;81(Pt 7):281-286. doi: 10.1107/S2053230X2500425X. Epub 2025 May 27.
3
The structure of amylosucrase from Deinococcus radiodurans has an unusual open active-site topology.来自耐辐射球菌的淀粉蔗糖酶结构具有异常的开放活性位点拓扑结构。
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Sep;69(Pt 9):973-8. doi: 10.1107/S1744309113021714. Epub 2013 Aug 19.
4
Phosphorylase Kinase Deficiency磷酸化酶激酶缺乏症
5
Isoleucine Binding and Regulation of and Threonine Dehydratase (IlvA).异亮氨酸与苏氨酸脱水酶(IlvA)的结合及调控
Biochemistry. 2025 Jul 1;64(13):2793-2810. doi: 10.1021/acs.biochem.5c00168. Epub 2025 Jun 10.
6
A Localized Complex of Two Protein Oligomers Controls the Orientation of Cell Polarity.两种蛋白质寡聚体的局部复合物控制细胞极性的方向。
mBio. 2017 Feb 28;8(1):e02238-16. doi: 10.1128/mBio.02238-16.
7
Ligand co-crystallization of aminoacyl-tRNA synthetases from infectious disease organisms.传染病原体的氨酰-tRNA 合成酶的配体共结晶。
Sci Rep. 2017 Mar 16;7(1):223. doi: 10.1038/s41598-017-00367-6.
8
Management of urinary stones by experts in stone disease (ESD 2025).结石病专家对尿路结石的管理(2025年结石病专家共识)
Arch Ital Urol Androl. 2025 Jun 30;97(2):14085. doi: 10.4081/aiua.2025.14085.
9
Cryo-EM structures of Mycobacterium tuberculosis imidazole glycerol phosphate dehydratase in the apo state and in the presence of small molecules.结核分枝杆菌咪唑甘油磷酸脱水酶在无配体状态和存在小分子情况下的冷冻电镜结构
Acta Crystallogr F Struct Biol Commun. 2025 Jul 1;81(Pt 7):297-305. doi: 10.1107/S2053230X25004595. Epub 2025 Jun 6.
10
Crystal structures of Mycobacterium tuberculosis and Mycobacterium thermoresistibile glycyl-tRNA synthetases in various liganded states.结核分枝杆菌和耐热分枝杆菌甘氨酰-tRNA合成酶在不同配体状态下的晶体结构。
PLoS One. 2025 Jun 30;20(6):e0326500. doi: 10.1371/journal.pone.0326500. eCollection 2025.

本文引用的文献

1
Sucrose phosphorylase from Alteromonas mediterranea: Structural insight into the regioselective α-glucosylation of (+)-catechin.地中海交替单胞菌蔗糖磷酸化酶:对 (+)-儿茶素区域选择性α-葡萄糖基化的结构见解。
Biochimie. 2024 Jun;221:13-19. doi: 10.1016/j.biochi.2024.01.004. Epub 2024 Jan 9.
2
Glucosylation mechanism of resveratrol through the mutant Q345F sucrose phosphorylase from the organism : a computational study.通过来源于生物体的突变体 Q345F 蔗糖磷酸化酶对白藜芦醇的糖化作用机制:一项计算研究。
Org Biomol Chem. 2022 Jul 6;20(26):5270-5283. doi: 10.1039/d2ob00821a.
3
Sucrose Phosphorylase and Related Enzymes in Glycoside Hydrolase Family 13: Discovery, Application and Engineering.
蔗糖磷酸化酶及其在糖苷水解酶家族 13 中的相关酶:发现、应用和工程。
Int J Mol Sci. 2020 Apr 5;21(7):2526. doi: 10.3390/ijms21072526.
4
A Single Point Mutation Converts GH84 -GlcNAc Hydrolases into Phosphorylases: Experimental and Theoretical Evidence.单点突变将 GH84-GlcNAc 水解酶转化为磷酸化酶:实验和理论证据。
J Am Chem Soc. 2020 Feb 5;142(5):2120-2124. doi: 10.1021/jacs.9b09655. Epub 2020 Jan 24.
5
Estimate your dose: RADDOSE-3D.估算你的剂量:RADDOSE-3D。
Protein Sci. 2018 Jan;27(1):217-228. doi: 10.1002/pro.3302. Epub 2017 Nov 6.
6
Redesign of the Active Site of Sucrose Phosphorylase through a Clash-Induced Cascade of Loop Shifts.通过碰撞诱导的环移位级联对蔗糖磷酸化酶活性位点进行重新设计。
Chembiochem. 2016 Jan 1;17(1):33-6. doi: 10.1002/cbic.201500514. Epub 2015 Dec 2.
7
Creating Space for Large Acceptors: Rational Biocatalyst Design for Resveratrol Glycosylation in an Aqueous System.为大受体创造空间:水相体系中白藜芦醇糖基化的理性生物催化剂设计。
Angew Chem Int Ed Engl. 2015 Aug 3;54(32):9289-92. doi: 10.1002/anie.201503605. Epub 2015 Jun 12.
8
The carbohydrate-active enzymes database (CAZy) in 2013.2013 版碳水化合物活性酶数据库(CAZy)。
Nucleic Acids Res. 2014 Jan;42(Database issue):D490-5. doi: 10.1093/nar/gkt1178. Epub 2013 Nov 21.
9
Towards automated crystallographic structure refinement with phenix.refine.利用phenix.refine实现自动化晶体学结构精修
Acta Crystallogr D Biol Crystallogr. 2012 Apr;68(Pt 4):352-67. doi: 10.1107/S0907444912001308. Epub 2012 Mar 16.
10
Improvement of molecular-replacement models with Sculptor.使用Sculptor改进分子置换模型。
Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):303-12. doi: 10.1107/S0907444910051218. Epub 2011 Mar 18.