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生命早期双歧杆菌母婴传播:微生物组学和基于培养的方法揭示婴儿肠道对母乳的更大贡献

Early life bifidobacterial mother-infant transmission: greater contribution from the infant gut to human milk revealed by microbiomic and culture-based methods.

作者信息

Wu Simou, Luo Gang, Jiang Fengling, Jia Wen, Li Jinxing, Huang Ting, Zhang Xuguang, Mao Yuejian, Su Shengpeng, Han Weiwei, He Fang, Cheng Ruyue

机构信息

Department of Nutrition and Food Hygiene, West China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, Sichuan, China.

Sichuan Tianfu New Area Public Health Center, Chengdu, Sichuan, China.

出版信息

mSystems. 2025 Jun 25:e0048025. doi: 10.1128/msystems.00480-25.


DOI:10.1128/msystems.00480-25
PMID:40558046
Abstract

UNLABELLED: The colonization and development of the gut microbiota during early life, especially , may be influenced by maternal bacterial communities, including those of human milk. However, the interaction of bacteria in mother-infant dyads during breastfeeding remains unclear. This study focused primarily on the characteristics and dynamics of the infant gut and human milk microbiota within the first month of life on the basis of a birth cohort and explored the interaction of the microbiota derived from the two niches by sequencing and culture-based methods, especially as the representative dominator in the infant gut. Infant feces and human milk samples from 21 mother-infant dyads were collected on days 0, 7, and 30 postpartum. The bacterial composition was identified by sequencing the 16S rRNA gene, and the contributions of the bacterial communities were estimated via SourceTracker2. Bifidobacterial strains were isolated from infant feces and human milk via culture-based methods. The suspected strains were identified through Sanger sequencing and genotyped via multilocus sequence typing (MLST). The bacterial communities were distinct between infant feces and human milk. Human milk microbes contribute 63.89%-77.61% to the infant's gut within the first month of life, whereas in the infant's gut contributes more (80.18%-84.30%) to human milk. A total of 60 bifidobacterial isolates were obtained from 10 pairs of mother-infant samples, 48 isolates from 10 out of 27 infant feces samples, and 12 isolates from 4 out of 27 human milk samples. Among these, 30 isolates were identified as and 18 were identified as subsp. . Strains belonging to from a single mother-infant pair were found to be monophyletic (ST: BRE-1), whereas this strain was found much earlier in infant feces across the three time points (collected on days 0, 7, and 30) than in human milk (collected on day 30). Our data suggest that during very early breastfeeding, human milk contributes a significant proportion of the overall bacterial population to the infant's gut, whereas the infant's gut selectively contributes a greater proportion of to human milk. Certain bifidobacterial strains, such as , are retrogradely transmitted from the infant's gut to the mother's human milk during breastfeeding, implying a potential challenge regarding the reliability of the source when potential probiotics are isolated from human milk. IMPORTANCE: Understanding how microbes, especially beneficial bacteria such as are shared between mothers and infants during breastfeeding is crucial for promoting infant health. Although most research has focused on transmission from mother to child, our study reveals a novel and significant reverse route: from the infant gut to breast milk. By combining microbiome sequencing with culture-based techniques, we provide evidence that specific strains of , especially , may transmit back to the mother during breastfeeding. This insight reshapes our understanding of microbial exchange within the mother-infant dyad and highlights breastfeeding as a bidirectional process that influences both maternal and infant microbiota. These findings may have important implications for designing probiotics and supporting early-life microbial development through maternal health interventions.

摘要

未标注:生命早期肠道微生物群的定殖和发育,尤其是 ,可能会受到母体细菌群落的影响,包括人乳中的细菌群落。然而,母乳喂养期间母婴二元组中细菌的相互作用仍不清楚。本研究主要基于一个出生队列,聚焦于出生后第一个月内婴儿肠道和人乳微生物群的特征和动态变化,并通过测序和基于培养的方法探索来自这两个生态位的微生物群的相互作用,尤其是作为婴儿肠道中代表性优势菌的 。在产后第0、7和30天收集了21对母婴二元组的婴儿粪便和人乳样本。通过对16S rRNA基因进行测序来鉴定细菌组成,并通过SourceTracker2评估细菌群落的贡献。通过基于培养的方法从婴儿粪便和人乳中分离双歧杆菌菌株。通过桑格测序鉴定疑似菌株,并通过多位点序列分型(MLST)进行基因分型。婴儿粪便和人乳中的细菌群落不同。在出生后第一个月内,人乳微生物对婴儿肠道细菌总数的贡献为63.89% - 77.61%,而婴儿肠道中的 对人乳的贡献更大(80.18% - 84.30%)。从10对母婴样本中总共获得了60株双歧杆菌分离株,其中48株来自27份婴儿粪便样本中的10份,12株来自27份人乳样本中的4份。其中,30株被鉴定为 ,18株被鉴定为 亚种。发现来自同一母婴二元组的属于 的菌株是单系的(序列型:BRE - 1),而该菌株在婴儿粪便中(在第0、7和30天收集)比在人乳中(在第30天收集)出现得更早。我们的数据表明,在极早期母乳喂养期间,人乳对婴儿肠道细菌总数的贡献很大,而婴儿肠道对人乳中 的贡献更大。某些双歧杆菌菌株,如 ,在母乳喂养期间会从婴儿肠道逆向传播到母亲的人乳中,这意味着从人乳中分离潜在益生菌时,来源可靠性存在潜在挑战。 重要性:了解母乳喂养期间微生物,尤其是有益细菌如 如何在母婴之间共享对于促进婴儿健康至关重要。尽管大多数研究集中在从母亲到孩子的传播,但我们的研究揭示了一条新的、重要的逆向途径:从婴儿肠道到母乳。通过将微生物组测序与基于培养技术相结合,我们提供了证据表明特定的 菌株,尤其是 ,可能在母乳喂养期间传回给母亲。这一见解重塑了我们对母婴二元组内微生物交换的理解,并突出了母乳喂养是一个影响母婴微生物群的双向过程。这些发现可能对设计益生菌以及通过母体健康干预支持生命早期微生物发育具有重要意义。

相似文献

[1]
Early life bifidobacterial mother-infant transmission: greater contribution from the infant gut to human milk revealed by microbiomic and culture-based methods.

mSystems. 2025-6-25

[2]
Human milk oligosaccharide metabolism and antibiotic resistance in early gut colonizers: insights from bifidobacteria and lactobacilli in the maternal-infant microbiome.

Gut Microbes. 2025-12

[3]
Transfer of Bacteria From Mothers to Infants Through Breast Milk: A Systematic Review.

Pediatr Infect Dis J. 2025-3-4

[4]
Cohort profile: Mother and Infant Metabolome and Microbiome (MIMM) study, a prospective cohort study of mothers and infants in Boston, Massachusetts.

BMJ Open. 2025-6-18

[5]
Multilocus sequence typing of bifidobacterial strains from infant's faeces and human milk: are bifidobacteria being sustainably shared during breastfeeding?

Benef Microbes. 2015-4-22

[6]
Multiple perinatal characteristics affect the association between maternal diabetes status and early neonatal gut microbiota.

mSphere. 2025-6-25

[7]
Mother's milk microbiota is associated with the developing gut microbial consortia in very-low-birth-weight infants.

Cell Rep Med. 2024-9-17

[8]
Optimal duration of exclusive breastfeeding.

Cochrane Database Syst Rev. 2002

[9]
Telephone support for women during pregnancy and the first six weeks postpartum.

Cochrane Database Syst Rev. 2013-7-18

[10]
Breastfeeding or breast milk for procedural pain in neonates.

Cochrane Database Syst Rev. 2023-8-29

本文引用的文献

[1]
The oral-gut microbiome axis in health and disease.

Nat Rev Microbiol. 2024-12

[2]
Delayed colonization of spp. and low prevalence of among infants of Asian ancestry born in Singapore: insights from the GUSTO cohort study.

Front Pediatr. 2024-6-10

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Microorganisms. 2024-5-17

[4]
Detailed mapping of Bifidobacterium strain transmission from mother to infant via a dual culture-based and metagenomic approach.

Nat Commun. 2023-5-25

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Cell Host Microbe. 2023-3-8

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Nature. 2023-2

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Eur J Nutr. 2023-3

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Benef Microbes. 2022-10-4

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Nutrients. 2022-3-29

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Metagenomic analysis of mother-infant gut microbiome reveals global distinct and shared microbial signatures.

Gut Microbes. 2021

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