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从分子角度看细菌病原体对抗生素压力的代谢重编程

Metabolic Rewiring of Bacterial Pathogens in Response to Antibiotic Pressure-A Molecular Perspective.

作者信息

Acierno Carlo, Barletta Fannia, Nevola Riccardo, Rinaldi Luca, Sasso Ferdinando Carlo, Adinolfi Luigi Elio, Caturano Alfredo

机构信息

Department of Infectious Diseases, San Carlo Hospital, 85100 Potenza, Italy.

Department of Anesthesiology and Intensive Care, San Carlo Hospital, 85100 Potenza, Italy.

出版信息

Int J Mol Sci. 2025 Jun 11;26(12):5574. doi: 10.3390/ijms26125574.

DOI:10.3390/ijms26125574
PMID:40565037
Abstract

Antibiotic pressure exerts profound effects on bacterial physiology, not limited to classical genetic resistance mechanisms. Increasing evidence highlights the ability of pathogens to undergo metabolic rewiring-an adaptive, reversible reorganization of core metabolic pathways that promotes survival under antimicrobial stress. This review provides a comprehensive analysis of antibiotic-induced metabolic adaptations, encompassing glycolysis, the tricarboxylic acid cycle, fermentation, redox balance, amino acid catabolism, and membrane biosynthesis. We critically examine how diverse antibiotic classes-including β-lactams, aminoglycosides, quinolones, glycopeptides, polymyxins, and antimetabolites-interact with bacterial metabolism to induce tolerance and persistence, often preceding stable resistance mutations. In parallel, we explore the ecological and host-derived signals-such as immunometabolites and quorum sensing-that modulate these metabolic responses. Therapeutically, targeting metabolic pathways offers promising strategies to potentiate antibiotic efficacy, including enzyme inhibition, metabolic adjuvants, and precision-guided therapy based on pathogen metabolic profiling. By framing metabolic plasticity as a dynamic and evolutionarily relevant phenomenon, this review proposes a unifying model linking transient tolerance to stable resistance. Integrating metabolic rewiring into antimicrobial research, clinical diagnostics, and therapeutic design represents a necessary paradigm shift in combating bacterial persistence and resistance.

摘要

抗生素压力对细菌生理学产生深远影响,不仅限于经典的遗传抗性机制。越来越多的证据表明,病原体有能力进行代谢重排——核心代谢途径的一种适应性、可逆性重组,以促进在抗菌应激下的存活。本综述全面分析了抗生素诱导的代谢适应性,包括糖酵解、三羧酸循环、发酵、氧化还原平衡、氨基酸分解代谢和膜生物合成。我们批判性地研究了包括β-内酰胺类、氨基糖苷类、喹诺酮类、糖肽类、多粘菌素类和抗代谢物在内的多种抗生素类别如何与细菌代谢相互作用,从而在稳定的抗性突变之前诱导耐受性和持续性。同时,我们探讨了调节这些代谢反应的生态和宿主衍生信号,如免疫代谢物和群体感应。在治疗方面,靶向代谢途径提供了增强抗生素疗效的有前景的策略,包括酶抑制、代谢佐剂以及基于病原体代谢谱的精准导向治疗。通过将代谢可塑性构建为一种动态且与进化相关的现象,本综述提出了一个将短暂耐受性与稳定抗性联系起来的统一模型。将代谢重排纳入抗菌研究、临床诊断和治疗设计,代表了对抗细菌持续性和抗性的必要范式转变。

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本文引用的文献

1
Multidrug-Resistant Infections and Metabolic Syndrome: An Overlooked Bidirectional Relationship.多重耐药感染与代谢综合征:一种被忽视的双向关系。
Biomedicines. 2025 May 30;13(6):1343. doi: 10.3390/biomedicines13061343.
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Metabolic state-driven nutrient-based approach to combat bacterial antibiotic resistance.基于代谢状态的营养方法对抗细菌抗生素耐药性
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Arginine utilization in is essential for pneumonia pathogenesis and is regulated by virulence regulator GacA.
精氨酸的利用在肺炎发病机制中至关重要,且受毒力调节因子GacA调控。
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Controlled burn: interconnections between energy-spilling pathways and metabolic signaling in bacteria.可控燃烧:细菌中能量溢出途径与代谢信号传导之间的相互联系
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Mefloquine reduces the bacterial membrane fluidity of and distorts the bacterial membrane when combined with polymyxin B.甲氟喹与多粘菌素B联合使用时,可降低细菌膜流动性并使细菌膜变形。
mBio. 2025 Apr 9;16(4):e0401624. doi: 10.1128/mbio.04016-24. Epub 2025 Feb 25.
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Unveiling the critical roles of cellular metabolism suppression in antibiotic tolerance.揭示细胞代谢抑制在抗生素耐受性中的关键作用。
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β-lactam antibiotics induce metabolic perturbations linked to ROS generation leads to bacterial impairment.β-内酰胺类抗生素诱导与活性氧生成相关的代谢紊乱,导致细菌受损。
Front Microbiol. 2024 Dec 6;15:1514825. doi: 10.3389/fmicb.2024.1514825. eCollection 2024.
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Adaptive physiological and metabolic alterations in Staphylococcus aureus evolution under vancomycin exposure.万古霉素暴露下金黄色葡萄球菌进化中的适应性生理和代谢改变。
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Lipidome of Acinetobacter baumannii antibiotic persister cells.鲍曼不动杆菌抗生素抗性休眠细胞的脂组学研究。
Biochim Biophys Acta Mol Cell Biol Lipids. 2024 Oct;1869(7):159539. doi: 10.1016/j.bbalip.2024.159539. Epub 2024 Jul 26.
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Bacterial persisters: molecular mechanisms and therapeutic development.细菌持久态:分子机制与治疗开发。
Signal Transduct Target Ther. 2024 Jul 17;9(1):174. doi: 10.1038/s41392-024-01866-5.