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宏基因组学揭示富营养化城市湖泊中与微生物维生素B12合成相关的抗性趋势

Metagenomic insights into resistance trends related to microbial VB12 synthesis in eutrophic urban lakes.

作者信息

Lan Ning, Mao Chengzhi, Chen Min, Wang Xuan, Bai Shuheng, Ren Juan

机构信息

Department of Radiotherapy, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, 710061, Shaanxi Province, People's Republic of China.

Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, 430072, Hubei Province, People's Republic of China.

出版信息

Sci Rep. 2025 Jul 1;15(1):20599. doi: 10.1038/s41598-025-06125-3.

Abstract

Vitamin B12 (VB12) is essential for human health, and its deficiency can lead to various health issues, including anemia and neurological problems. Additionally, the presence of antibiotic resistance genes in various environments raises concerns about the spread of antibiotic resistance. This study aims to explore potential connections between these two functional gene categories in freshwater environments, which are closely intertwined with human health. We conducted a comprehensive metagenomic sequencing analysis across 23 sampling points from five different eutrophic urban lakes. The results highlight the dominance of the precorrin-2 synthesis pathway in the microbial synthesis of VB12 within urban lakes. Eutrophication may potentially enhance the precorrin-2 synthesis pathway while inhibiting others. The risk of antibiotic resistance is reduced in the anaerobic pathway of VB12 synthesis, while the abundance of metal resistance genes is increased. Binning analysis reveals that 26 metagenome-assembled genomes (MAGs) actively participate in VB12 synthesis, with at least 4 MAGs showing resistance during the VB12 synthesis process and demonstrating pathogenicity. These findings provide critical insights into the VB12 synthesis process and its implications for human health in terms of resistance risks.

摘要

维生素B12(VB12)对人体健康至关重要,其缺乏会导致各种健康问题,包括贫血和神经问题。此外,各种环境中抗生素抗性基因的存在引发了对抗生素抗性传播的担忧。本研究旨在探索淡水环境中这两类功能基因之间的潜在联系,淡水环境与人类健康密切相关。我们对来自五个不同富营养化城市湖泊的23个采样点进行了全面的宏基因组测序分析。结果表明,在城市湖泊中微生物合成VB12的过程中,前咕啉-2合成途径占主导地位。富营养化可能会增强前咕啉-2合成途径,同时抑制其他途径。在VB12合成的厌氧途径中,抗生素抗性风险降低,而金属抗性基因的丰度增加。分箱分析表明,26个宏基因组组装基因组(MAG)积极参与VB12合成,至少4个MAG在VB12合成过程中表现出抗性并具有致病性。这些发现为VB12合成过程及其在抗性风险方面对人类健康的影响提供了关键见解。

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