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一种基于图形的计算方法,用于药物设计中的物理化学性质建模。

A graph-based computational approach for modeling physicochemical properties in drug design.

作者信息

Al-Dayel Ibrahim, Khan Meraj Ali, Hanif Muhammad Faisal, Siddiqui Muhammad Kamran, Hanif Saba, Gegbe Brima

机构信息

Department of Mathematics and Statistics, College of Science, Imam Mohammad Ibn Saud Islamic University (IMSIU), P.O. Box 65892, 11566, Riyadh, Saudi Arabia.

Department of Mathematics and Statistics, The University of Lahore, Lahore Campus, Lahore, Pakistan.

出版信息

Sci Rep. 2025 Jul 1;15(1):21170. doi: 10.1038/s41598-025-06624-3.

Abstract

The efficacy and effectiveness of antibiotics and neuropathic drugs are essentially guided by their physicochemical properties governing stability, bioavailability, and therapeutic activity. This work utilises mathematical modelling and quantitative structure-property relationship (QSPR) analysis for predicting important physicochemical properties such as boiling point, enthalpy of vaporisation, flash point, and molar refraction of chosen antibiotics and neuropathic drugs. Modified degree-based topological indices are utilised as molecular descriptors for correlations between physicochemical functionality and molecular structure. Linear and quadratic forms are various forms of regression models employed for improved predictions. The findings exhibit excellent performance of quadratic models across all but one property compared to linear models, highlighted by significant statistical markers like high [Formula: see text] values and low error margins. These results highlight the potential use of topological descriptors in combination with sound mathematical frameworks for drug optimisation and early-stage screening.

摘要

抗生素和神经性药物的功效和有效性本质上是由其控制稳定性、生物利用度和治疗活性的物理化学性质所指导的。这项工作利用数学建模和定量结构-性质关系(QSPR)分析来预测所选抗生素和神经性药物的重要物理化学性质,如沸点、汽化焓、闪点和摩尔折射度。基于度的修正拓扑指数被用作分子描述符,以关联物理化学功能和分子结构。线性和二次形式是用于改进预测的各种回归模型形式。研究结果表明,与线性模型相比,二次模型在除一项性质外的所有性质上均表现出优异性能,高[公式:见正文]值和低误差 margins 等显著统计指标突出了这一点。这些结果突出了拓扑描述符与合理数学框架相结合在药物优化和早期筛选中的潜在用途。

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