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染色质在逆转录病毒整合前复合体功能中的作用。

The role of chromatin in retroviral preintegration complex function.

作者信息

Sapp Nicklas, Prakash Prem, Chakraborty Rajasree, Balasubramaniam Muthukumar, Dash Chandravanu

机构信息

Department of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.

Center for AIDS Health Disparities Research, School of Medicine, Meharry Medical College, Nashville, Tennessee, USA; Department of Microbiology, Immunology, and Physiology, School of Medicine, Meharry Medical College, Nashville, Tennessee, USA.

出版信息

J Biol Chem. 2025 Jul 3;301(8):110440. doi: 10.1016/j.jbc.2025.110440.

Abstract

Retroviral replication has two distinctive features, reverse transcription of the viral ssRNA genome into a dsDNA and integration of the viral DNA into the host genome. Viral DNA integration establishes a provirus in the host genome that resides as a stable viral genetic element for the life of the cell and serves as the source of progeny virion production. However, integration requires the viral preintegration complex (PIC) to overcome the structural barriers of the densely packed chromatin to access the host DNA. Eukaryotic chromosomes are organized by the repeating units of nucleosomes. A nucleosome comprises of a DNA segment of ∼150 base pairs compacted by an octamer of histone proteins, which regulate access to the DNA through a network of chemical modifications. Interestingly, several histone tail modifications play an outsized role in regulating retroviral integration into specific regions of the host genome. Studies in the last few decades have identified several viral and host factors that promote retroviral integration and regulate integration targeting. However, the interaction between the PIC and host nucleosomes that promote retroviral integration is an understudied area. In this review, we will focus on the biochemical and molecular interactions of retroviral PICs with the host nucleosome in an attempt to identify the barriers and factors involved in retroviral integration.

摘要

逆转录病毒复制有两个显著特征,即将病毒单链RNA基因组逆转录为双链DNA以及将病毒DNA整合到宿主基因组中。病毒DNA整合在宿主基因组中建立一个前病毒,它作为细胞生命期内稳定的病毒遗传元件存在,并作为子代病毒粒子产生的来源。然而,整合需要病毒前整合复合物(PIC)克服紧密堆积的染色质的结构障碍以接触宿主DNA。真核染色体由核小体的重复单元组成。一个核小体由一段约150个碱基对的DNA片段组成,该片段被组蛋白八聚体压缩,组蛋白通过化学修饰网络调节对DNA的接触。有趣的是,几种组蛋白尾部修饰在调节逆转录病毒整合到宿主基因组的特定区域中发挥着巨大作用。过去几十年的研究已经鉴定出几种促进逆转录病毒整合并调节整合靶向的病毒和宿主因子。然而,促进逆转录病毒整合的PIC与宿主核小体之间的相互作用是一个研究不足的领域。在本综述中,我们将聚焦于逆转录病毒PIC与宿主核小体的生化和分子相互作用,试图确定参与逆转录病毒整合的障碍和因子。

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