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PHB2作为泛癌潜在生物标志物的作用:多数据库分析

Role of PHB2 as a potential biomarker in pan-cancer: a multi-database analysis.

作者信息

Zhang Jingxin

机构信息

The First Clinical Medical College, Xuzhou Medical University, Xuzhou, Jiangsu, China.

出版信息

Sci Rep. 2025 Jul 4;15(1):23933. doi: 10.1038/s41598-025-07818-5.

DOI:10.1038/s41598-025-07818-5
PMID:40615430
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12227697/
Abstract

Prohibitin2 (PHB2) is a mitochondrial endosomal protein that is closely linked to tumors; however, its specific molecular role remains unclear. Therefore, this study investigates the role of PHB2 in cancer. Multiple databases, including cBioPortal, PhosphoNET, and AlphaFold, were accessed to investigate this issue. The findings indicated that PHB2 expression in tumor tissues exceeded that in normal tissues, with PHB2 localized in mitochondria. Patients diagnosed with bladder and lung adenocarcinomas exhibiting elevated PHB2 expression demonstrated an increased survival rate compared to those with reduced expression levels. Conversely, the opposite was observed in patients with renal clear cell carcinoma and breast cancer. In pan-cancer, the mutation rate of PHB2 was elevated, with several overlapping amino acid sites exhibiting tumor mutations and post-translational modifications, including phosphorylation at tyrosine 121, acetylation at threonine 263, and ubiquitination at lysine 296. Multiple overlapping sites of amino acid phosphorylation modifications and mutations were identified in PHB2, specifically at threonine 42, tyrosine 121, and threonine 263. The three-dimensional predicted structure of PHB2 was analyzed utilizing the AlphaFold database. The pathogenicity mutation heatmap indicated that the overlapping sites of amino acid mutations and post-translational modifications, including phosphorylation (threonine 42, tyrosine 121, and threonine 263), acetylation, and ubiquitination (lysine 296), were significantly pathogenic. In conclusion, PHB2 exhibits cancer-type-specific prognostic associations. Its overlapping mutation and modification sites suggest potential functional importance, supporting its role as a candidate biomarker for further validation in pan-cancer contexts.

摘要

prohibitin2(PHB2)是一种线粒体内涵体蛋白,与肿瘤密切相关;然而,其具体分子作用仍不清楚。因此,本研究调查了PHB2在癌症中的作用。通过访问包括cBioPortal、PhosphoNET和AlphaFold在内的多个数据库来研究这个问题。研究结果表明,肿瘤组织中PHB2的表达超过正常组织,且PHB2定位于线粒体。被诊断为膀胱和肺腺癌且PHB2表达升高的患者与表达水平降低的患者相比,生存率有所提高。相反,在肾透明细胞癌和乳腺癌患者中观察到相反的情况。在泛癌中,PHB2的突变率升高,有几个重叠的氨基酸位点表现出肿瘤突变和翻译后修饰,包括酪氨酸121磷酸化、苏氨酸263乙酰化和赖氨酸296泛素化。在PHB2中鉴定出多个氨基酸磷酸化修饰和突变的重叠位点,特别是在苏氨酸42、酪氨酸121和苏氨酸263处。利用AlphaFold数据库分析了PHB2的三维预测结构。致病性突变热图表明,氨基酸突变和翻译后修饰的重叠位点,包括磷酸化(苏氨酸42、酪氨酸121和苏氨酸263)、乙酰化和泛素化(赖氨酸296),具有显著致病性。总之,PHB2表现出癌症类型特异性的预后关联。其重叠的突变和修饰位点表明其潜在的功能重要性,支持其作为候选生物标志物在泛癌背景下进一步验证的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2752/12227697/3aa2ebef52b6/41598_2025_7818_Fig7_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2752/12227697/3aa2ebef52b6/41598_2025_7818_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2752/12227697/13462da3ad31/41598_2025_7818_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2752/12227697/60662bfb0883/41598_2025_7818_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2752/12227697/6effc4e40a7b/41598_2025_7818_Fig3_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2752/12227697/95790420965f/41598_2025_7818_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2752/12227697/d512d792b557/41598_2025_7818_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2752/12227697/3aa2ebef52b6/41598_2025_7818_Fig7_HTML.jpg

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本文引用的文献

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Aldehyde Dehydrogenase 2 Lactylation Aggravates Mitochondrial Dysfunction by Disrupting PHB2 Mediated Mitophagy in Acute Kidney Injury.乙醛脱氢酶2乳酸化通过破坏急性肾损伤中PHB2介导的线粒体自噬加重线粒体功能障碍。
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Efficient PHB2 (prohibitin 2) exposure during mitophagy depends on VDAC1 (voltage dependent anion channel 1).线粒体自噬过程中高效的PHB2(抑癌蛋白2)暴露依赖于VDAC1(电压依赖性阴离子通道1)。
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HKDC1 functions as a glucose sensor and promotes metabolic adaptation and cancer growth via interaction with PHB2.
HKDC1作为一种葡萄糖传感器,通过与PHB2相互作用促进代谢适应和癌症生长。
Cell Death Differ. 2024 Dec;31(12):1595-1610. doi: 10.1038/s41418-024-01392-5. Epub 2024 Oct 7.
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Prohibitin 2 orchestrates long noncoding RNA and gene transcription to accelerate tumorigenesis.抑素 2 通过协调长链非编码 RNA 和基因转录来加速肿瘤发生。
Nat Commun. 2024 Sep 27;15(1):8385. doi: 10.1038/s41467-024-52425-z.
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Targeted proteomics addresses selectivity and complexity of protein degradation by autophagy.靶向蛋白质组学研究自噬介导的蛋白质降解的选择性和复杂性。
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Loss of prohibitin 2 in Schwann cells dysregulates key transcription factors controlling developmental myelination.施万细胞中 prohibitin 2 的缺失会扰乱控制发育性髓鞘形成的关键转录因子。
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Prohibitin 2 confers NADPH oxidase 1-mediated cytosolic oxidative signaling to promote gastric cancer progression by ERK activation.抑素 2 通过 ERK 激活赋予 NADPH 氧化酶 1 介导的细胞质氧化信号传导,从而促进胃癌的进展。
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