• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

不动杆菌属YT-02中环己胺氧化酶的晶体结构揭示了催化活性和底物特异性的关键残基。

Crystal structure of cyclohexylamine oxidase from Acinetobacter sp. YT-02 reveals key residues for catalytic activity and substrate specificity.

作者信息

Wu Jing, Han Zhenggang, Li Pengrong, Li Jing, Chen Yuanyuan, Ning Shangbo, Chao Hong-Jun, Gao Xue-Wang, Yan Dazhong

机构信息

School of Life Science and Technology, Wuhan Polytechnic University, Wuhan, 430023, PR China.

Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing, 100190 PR China.

出版信息

Enzyme Microb Technol. 2025 Oct;190:110700. doi: 10.1016/j.enzmictec.2025.110700. Epub 2025 Jun 23.

DOI:10.1016/j.enzmictec.2025.110700
PMID:40617067
Abstract

Cyclohexylamine oxidase is a member of amine oxidases that catalyzes the conversion of cyclohexylamine to cyclohexanone. In our previous work, the enzymatic activity assay of cyclohexylamine oxidase CHAO indicated that its specific activity towards cyclohexylamine of CHAO was ten times higher than that of its homolog CHAO. In this study, the crystal structure of CHAO was determined by the molecular replacement method at a resolution of 1.49 Å. The atomic structure revealed that the amino acid residues Leu302, Trp70, Phe197, Phe349, and Tyr440 constitute the active center pocket of the enzyme. Amino acid residues Ile180, Leu181, and Trp332 separate the active center pocket and an intermediate pocket. Moreover, a molecular dynamics (MD) simulation and the calculation of the binding free energy were performed to predict substrate entry and product release from cyclohexylamine oxidases. Single-amino acid substitution mutants (W70A, I180A, L181A, I208A, F197A, L302A, W332A, F349A, and Y440A) of CHAO were constructed to investigate the role of these amino acid residues in enzymatic properties and substrate specificity. The results indicated that both the amino acid residues in the active center pocket and gating the two pockets affected the activity or substrate specificity of CHAO. This study on the structure and catalytic mechanism of cyclohexylamine oxidase is beneficial to eliminating toxic amine compounds in the environment.

摘要

环己胺氧化酶是胺氧化酶家族的一员,可催化环己胺转化为环己酮。在我们之前的工作中,环己胺氧化酶CHAO的酶活性测定表明,其对环己胺的比活性是其同源物CHAO的十倍。在本研究中,通过分子置换法以1.49 Å的分辨率测定了CHAO的晶体结构。原子结构显示,氨基酸残基Leu302、Trp70、Phe197、Phe349和Tyr440构成了该酶的活性中心口袋。氨基酸残基Ile180、Leu181和Trp332将活性中心口袋与一个中间口袋分隔开。此外,进行了分子动力学(MD)模拟和结合自由能计算,以预测环己胺氧化酶的底物进入和产物释放。构建了CHAO的单氨基酸取代突变体(W70A、I180A、L181A、I208A、F197A、L302A、W332A、F349A和Y440A),以研究这些氨基酸残基在酶性质和底物特异性中的作用。结果表明,活性中心口袋中的氨基酸残基以及分隔两个口袋的结构都影响了CHAO的活性或底物特异性。这项关于环己胺氧化酶结构和催化机制的研究有助于消除环境中的有毒胺类化合物。

相似文献

1
Crystal structure of cyclohexylamine oxidase from Acinetobacter sp. YT-02 reveals key residues for catalytic activity and substrate specificity.不动杆菌属YT-02中环己胺氧化酶的晶体结构揭示了催化活性和底物特异性的关键残基。
Enzyme Microb Technol. 2025 Oct;190:110700. doi: 10.1016/j.enzmictec.2025.110700. Epub 2025 Jun 23.
2
Structural determinants of unique substrate specificity of d-amino acid oxidase of the thermophilic fungus Rasamsonia emersonii.嗜热真菌埃默森拉氏菌D-氨基酸氧化酶独特底物特异性的结构决定因素。
Enzyme Microb Technol. 2025 Oct;190:110705. doi: 10.1016/j.enzmictec.2025.110705. Epub 2025 Jul 1.
3
Crystal structure of dihydroorotate dehydrogenase from Helicobacter pylori with bound flavin mononucleotide.幽门螺杆菌二氢乳清酸脱氢酶与结合黄素单核苷酸的晶体结构。
Acta Crystallogr F Struct Biol Commun. 2025 Mar 1;81(Pt 3):108-117. doi: 10.1107/S2053230X25000858. Epub 2025 Feb 17.
4
Mutational and structural analysis of ribose 5-phosphate isomerase B from Acetivibrio thermocellus: relationship between transformation efficiency and substrate binding pocket conformation.嗜热栖热放线菌核糖-5-磷酸异构酶B的突变与结构分析:转化效率与底物结合口袋构象之间的关系
Enzyme Microb Technol. 2025 Oct;190:110671. doi: 10.1016/j.enzmictec.2025.110671. Epub 2025 May 29.
5
Characterization of a New Cyclohexylamine Oxidase From sp. YT-02.来自YT-02菌株的新型环己胺氧化酶的特性分析
Front Microbiol. 2018 Nov 22;9:2848. doi: 10.3389/fmicb.2018.02848. eCollection 2018.
6
Comparison of active site mutations at subsite + 2 of Anoxybacillus ayderensis A9 β-glucosidase for hydrolysis of pNPG and polydatin.艾德氏嗜热栖芽孢杆菌A9β-葡萄糖苷酶亚位点+2处活性位点突变对pNPG和虎杖苷水解作用的比较
BMC Biotechnol. 2025 Jul 1;25(1):52. doi: 10.1186/s12896-025-00984-4.
7
Key residues controlling binding of diverse ligands to human cytochrome P450 2A enzymes.控制多种配体与人细胞色素P450 2A酶结合的关键残基。
Drug Metab Dispos. 2009 Jun;37(6):1319-27. doi: 10.1124/dmd.109.026765. Epub 2009 Feb 27.
8
Crystal Structure, Modeling, and Identification of Key Residues Provide Insights into the Mechanism of the Key Toxoflavin Biosynthesis Protein ToxD.关键毒素黄素生物合成蛋白ToxD的晶体结构、建模及关键残基鉴定为其作用机制提供见解
Biochemistry. 2025 Mar 18;64(6):1199-1211. doi: 10.1021/acs.biochem.4c00421. Epub 2025 Mar 6.
9
Structural insights into the role of the prosegment binding loop in a papain-superfamily cysteine protease from Treponema denticola.对齿垢密螺旋体中木瓜蛋白酶超家族半胱氨酸蛋白酶的前肽结合环作用的结构见解。
Acta Crystallogr F Struct Biol Commun. 2025 Feb 1;81(Pt 2):53-61. doi: 10.1107/S2053230X25000378. Epub 2025 Jan 23.
10
Identification of active site residues involved in substrate binding and cofactor specificity in a putrescine N-monooxygenase.鉴定腐胺N-单加氧酶中参与底物结合和辅因子特异性的活性位点残基。
Arch Biochem Biophys. 2025 Sep;771:110519. doi: 10.1016/j.abb.2025.110519. Epub 2025 Jun 26.