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转录本和蛋白质信号的空间校对扩增

Spatial Proofreading Amplification of Transcript and Protein Signals.

作者信息

Tischbirek Carsten H, Colón Katsuya L, Lobbia Saori, Cronin Christopher J, Cai Long

机构信息

Division of Biology and Biological Engineering, California Institute of Technology, CA, USA.

出版信息

bioRxiv. 2025 Jun 15:2025.06.11.659176. doi: 10.1101/2025.06.11.659176.

Abstract

Spatial transcriptomics experiments greatly benefit from brighter signals that improve detection efficiency and shorten imaging times. Here, we introduce a new enzyme-free signal amplification method inspired by the kinetic proofreading principle, in which short oligonucleotide probes are iteratively deposited at their target site and covalently photo-crosslinked to the cell, forming highly stable DNA assemblies. The method results in more than 500-fold signal amplification and supports multiplex readout capabilities.

摘要

空间转录组学实验因更明亮的信号而受益匪浅,这些信号提高了检测效率并缩短了成像时间。在此,我们引入了一种受动力学校对原理启发的新型无酶信号放大方法,其中短寡核苷酸探针在其靶位点迭代沉积,并与细胞进行共价光交联,形成高度稳定的DNA组装体。该方法可实现超过500倍的信号放大,并支持多重读出能力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d581/12259114/15c4a76df9cd/nihpp-2025.06.11.659176v1-f0001.jpg

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