Javid Hanan, Yousuf Umar, Ul Qadir Roof, Magray Junaid A, Wani Bilal A, Islam Tajamul, Nawchoo Irshad A, Gulzar Shabana
Plant Reproductive Biology, Genetic Diversity and Phytochemistry Research Laboratory, Department of Botany, University of Kashmir, Srinagar, India.
Center of Research for Development (CORD), University of Kashmir, Srinagar, India.
Front Pharmacol. 2025 Jul 1;16:1575727. doi: 10.3389/fphar.2025.1575727. eCollection 2025.
is an important medicinal plant from the Polygonaceae family. It is been utilized traditionally to cure several ailments. However, its essential bioactivities and antimicrobial mechanisms have remained unexplored.
The present study aimed to investigate the antimicrobial mechanisms of various extracts of through the application of standard antimicrobial assays. We investigated by molecular dynamics (MD) simulation studies, the possible targets of one of the compounds found in this plant.
The qualitative and quantitative analysis of phytochemicals was performed using established methodologies. Additionally, high-resolution liquid chromatography-mass spectrometry (HR/LC-MS) analysis was carried out on the active extracts to identify the secondary metabolites present in various parts of . Moreover, using methods, these extracts have been tested for antimicrobial activity against a variety of bacterial () and fungal () strains. Besides, molecular modeling of identified compounds was conducted against various crucial microbial drug target proteins.
Metabolic profiling demonstrates that around 22 and 35 bioactive compounds are identified from the belowground and the aboveground parts, respectively, and many of these compounds have therapeutic uses. Further, ethyl acetate extracts from the underground parts showed the widest Inhibition Zone Diameter (IZD) at 18.07 ± 0.38 mm against at 1,000 μg/mL, and the smallest IZD was shown by methanolic extracts of aboveground parts against (5.50 ± 0.39 mm). The inhibitory activity of various doses of plant extracts against and was also tested. At a concentration of 600 μg/mL, ethyl acetate extracts from the underground parts exhibited the most significant inhibition against , leading to an 84.56% ± 2.56% reduction in mycelial growth compared to the control. In contrast, the lowest inhibition was observed in methanol extracts from the aboveground parts against , resulting in a 26.18% ± 2.58% inhibition in mycelial growth. In addition, molecular docking and MD simulation studies on the compounds revealed significant binding affinity, supporting the observed antimicrobial activity.
Overall, this study offers an extensive understanding of the chemical composition of extracts and their antimicrobial potential. Furthermore, Computational studies have provided deep insights into how plant secondary metabolites interact with microbial drug target proteins, leading to more targeted and effective antimicrobial therapies.
是蓼科一种重要的药用植物。传统上它被用于治疗多种疾病。然而,其重要的生物活性和抗菌机制仍未被探索。
本研究旨在通过应用标准抗菌试验来研究该植物各种提取物的抗菌机制。我们通过分子动力学(MD)模拟研究,探究了该植物中一种化合物的可能靶点。
采用既定方法对植物化学物质进行定性和定量分析。此外,对活性提取物进行了高分辨率液相色谱 - 质谱(HR/LC - MS)分析,以鉴定该植物各部分中存在的次生代谢产物。此外,使用这些方法,对这些提取物针对多种细菌()和真菌()菌株进行了抗菌活性测试。此外,针对已鉴定化合物对各种关键微生物药物靶蛋白进行了分子建模。
代谢谱分析表明,分别从地下部分和地上部分鉴定出约22种和35种生物活性化合物,其中许多化合物具有治疗用途。此外,地下部分的乙酸乙酯提取物在1000μg/mL浓度下对表现出最宽的抑菌圈直径(IZD),为18.07±0.38mm,地上部分的甲醇提取物对的抑菌圈直径最小(5.50±0.39mm)。还测试了不同剂量的植物提取物对和的抑制活性。在600μg/mL浓度下,地下部分的乙酸乙酯提取物对表现出最显著的抑制作用,与对照相比,菌丝体生长减少了84.56%±2.56%。相比之下,地上部分的甲醇提取物对的抑制作用最低,导致菌丝体生长抑制率为26.18%±2.58%。此外,对这些化合物的分子对接和MD模拟研究显示出显著的结合亲和力,支持了观察到的抗菌活性。
总体而言,本研究对该植物提取物的化学成分及其抗菌潜力提供了广泛了解。此外,计算研究深入揭示了植物次生代谢产物如何与微生物药物靶蛋白相互作用,从而实现更具针对性和有效性的抗菌治疗。