Hinz Aaron, Moggridge Jason A, Ke Hanna, Hicks Alexandra Ma, Doukhanine Evgueni, Fralick Michael, Hug Laura A, MacFadden Derek R, Mejbel Hebah S, Nott Caroline, Raudanskis Ashley, Thampi Nisha, Wong Alex, Kassen Rees
Department of Biology, University of Ottawa, Ottawa, Ontario, Canada.
Department of Biology, McGill University, Montreal, Quebec, Canada.
J Assoc Med Microbiol Infect Dis Can. 2024 Dec 19;9(4):284-293. doi: 10.3138/jammi-2024-0002. eCollection 2024 Dec.
Environmental surveillance of SARS-CoV-2 via wastewater has become an invaluable tool for population-level surveillance. Built environment sampling may provide complementary spatially refined detection for viral surveillance in congregate settings such as universities.
We conducted a prospective environmental surveillance study at the University of Ottawa between September 2021 and April 2022. Floor surface samples were collected twice weekly from six university buildings and analyzed for the presence of SARS-CoV-2 using quantitative PCR. A Poisson regression was used to model the campus-wide COVID-19 cases predicted from the fraction of floor swabs positive for SARS-CoV-2 RNA, building CO levels, Wi-Fi usage, and SARS-CoV-2 RNA levels in city wastewater. Building-level cases were modelled using viral copies detected in floor samples as a predictor.
Over the 32-week study period, we collected 554 floor swabs at six university buildings. Overall, 13% of swabs were PCR positive for SARS-CoV-2, with positivity ranging between 4.8% and 32.7% among buildings. Both floor swab positivity (Spearman = 0.74, 95% CI 0.53 to 0.87) and city wastewater signal (Spearman = 0.50, 95% CI 0.18 to 0.73) positively correlated with on-campus COVID-19 cases. In addition, built environment detection was a predictor of cases linked to individual university buildings.
Detection of SARS-CoV-2 RNA on floors and viral RNA levels in city-wide wastewater were strongly associated with the incidence of COVID-19 cases on a university campus. These data suggest a potential role for institutional built environment sampling, used together with wastewater surveillance, for predicting COVID-19 cases at both campus-wide and building-level scales.
通过废水对严重急性呼吸综合征冠状病毒2(SARS-CoV-2)进行环境监测已成为人群水平监测的一项宝贵工具。建筑环境采样可为大学等聚集场所的病毒监测提供补充性的空间精细化检测。
2021年9月至2022年4月期间,我们在渥太华大学开展了一项前瞻性环境监测研究。每周两次从六栋大学建筑采集地面样本,并用定量聚合酶链反应(PCR)分析样本中SARS-CoV-2的存在情况。采用泊松回归模型,根据SARS-CoV-2 RNA阳性的地面拭子比例、建筑一氧化碳水平、无线网络使用情况以及城市废水中的SARS-CoV-2 RNA水平,对全校园的冠状病毒病2019(COVID-19)病例进行预测。以在地面样本中检测到的病毒拷贝数作为预测指标,对建筑层面的病例进行建模。
在为期32周的研究期间,我们在六栋大学建筑采集了554份地面拭子样本。总体而言,13%的拭子样本SARS-CoV-2 PCR检测呈阳性,各建筑的阳性率在4.8%至32.7%之间。地面拭子阳性率(斯皮尔曼相关系数=0.74,95%置信区间0.53至0.87)和城市废水信号(斯皮尔曼相关系数=0.50,95%置信区间0.18至0.73)均与校园内COVID-19病例呈正相关。此外,建筑环境检测是与个别大学建筑相关病例的预测指标。
地面上SARS-CoV-2 RNA的检测以及城市废水中的病毒RNA水平与大学校园COVID-19病例的发生率密切相关。这些数据表明,机构建筑环境采样与废水监测相结合,在预测全校园和建筑层面的COVID-19病例方面可能发挥作用。