Zhang Zhiyong, Zhu Xiaoming, Zhang Tao, Li Chuang, Zhang Dapeng, Li Weiming, Zhao Lin
Heart Center and Beijing Key Laboratory of Hypertension, Beijing Chaoyang Hospital, Capital Medical University, Beijing, 100020, People's Republic of China.
Int J Gen Med. 2025 Jul 15;18:3901-3917. doi: 10.2147/IJGM.S527955. eCollection 2025.
To explore the roles of ferroptosis and immune regulation in coronary artery disease (CAD) and find potential diagnostic biomarkers.
Three gene expression profile datasets were used, with GSE202625 as the training set and GSE42148 and GSE180081 as validation sets. LIMMA identified differentially expressed genes (DEGs) between CAD and control groups. ClusterProfiler conducted functional enrichment analysis. Ferroptosis-related genes from FerrDb were intersected with DEGs. ssGSEA and Pearson analysis analyzed immune cell subsets. LASSO built a diagnostic model. In vitro and in vivo experiments included qPCR, ELISA, pathological examination, and Western blot.
In the GSE202625 dataset, 70 genes were upregulated and 895 genes were downregulated in CAD samples. A total of 29 ferroptosis-associated DEGs were identified, and immune cell profiling revealed differences in immune cell subsets between CAD and healthy cohorts. LASSO identified six genes (IDH1, MMD, NDRG1, WIPI1, BID, and TRIM26) for the diagnostic model, which collectively achieved an AUC of 0.904 in the training dataset, 0.776 in the GSE180081 validation dataset, and 0.902 in the GSE42148 validation dataset. IDH1 had the highest diagnostic efficacy with an AUC of 0.821. Clinically, 26 CAD patients (angiographically confirmed, ≥50% luminal stenosis) and 12 controls showed that CAD patients had higher prevalence of hypertension, diabetes, and elevated lipid markers. IDH1 was downregulated in CAD patients and inversely correlated with the Gensini score. In the CAD mouse model, IDH1 expression was decreased in aortic tissues.
Six genes correlated with CAD, and the multi-gene diagnostic model performed well. IDH1 was a potential CAD biomarker, aiding CAD diagnosis and treatment research.
探讨铁死亡和免疫调节在冠状动脉疾病(CAD)中的作用,并寻找潜在的诊断生物标志物。
使用三个基因表达谱数据集,将GSE202625作为训练集,GSE42148和GSE180081作为验证集。LIMMA鉴定CAD组和对照组之间的差异表达基因(DEG)。ClusterProfiler进行功能富集分析。将来自FerrDb的铁死亡相关基因与DEG进行交集分析。ssGSEA和Pearson分析分析免疫细胞亚群。LASSO构建诊断模型。体外和体内实验包括qPCR、ELISA、病理检查和蛋白质印迹法。
在GSE202625数据集中,CAD样本中有70个基因上调,895个基因下调。共鉴定出29个与铁死亡相关的DEG,免疫细胞分析显示CAD组和健康队列之间免疫细胞亚群存在差异。LASSO为诊断模型鉴定出六个基因(IDH1、MMD、NDRG1、WIPI1、BID和TRIM26),这些基因在训练数据集中的AUC为0.904,在GSE180081验证数据集中为0.776,在GSE42148验证数据集中为0.902。IDH1的诊断效能最高,AUC为0.821。临床上,26例CAD患者(血管造影证实,管腔狭窄≥50%)和12例对照显示,CAD患者高血压、糖尿病和血脂标志物升高的患病率更高。CAD患者中IDH1下调,且与Gensini评分呈负相关。在CAD小鼠模型中,主动脉组织中IDH1表达降低。
六个基因与CAD相关,多基因诊断模型表现良好。IDH1是潜在的CAD生物标志物,有助于CAD的诊断和治疗研究。