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单细胞和空间转录组学揭示复发性鼻咽癌的放射抗性和免疫逃逸机制。

Single-cell and spatial transcriptomics reveal mechanisms of radioresistance and immune escape in recurrent nasopharyngeal carcinoma.

作者信息

You Rui, Shen Qunlun, Lin Chao, Dong Kangning, Liu Xiao, Xu Hanshi, Hu Wanming, Xie Yulong, Xie Ruoqi, Song Xiaoyi, Huang Chunliu, Wu Jinhui, Yu Tao, Li Huifeng, Wang Zining, Chen Keming, Zou Xiong, Huang Peiyu, Hua Yijun, Liu Youping, Xia Tianliang, Zhang Shihua, Chen Mingyuan

机构信息

Nasopharyngeal Cancer Center, The Fifth Affiliated Hospital, Sun Yat-sen University, Zhuhai, The People's Republic of China.

Department of Nasopharyngeal Carcinoma, Sun Yat-sen University Cancer Center, Guangzhou, The People's Republic of China.

出版信息

Nat Genet. 2025 Jul 21. doi: 10.1038/s41588-025-02253-8.

DOI:10.1038/s41588-025-02253-8
PMID:40691404
Abstract

Radiotherapy resistance and immune evasion are prominent features of recurrent nasopharyngeal carcinoma (rNPC). However, their mechanisms remain incompletely understood. Here, we conducted single-cell and spatial transcriptomics analysis of 39 tumors from 24 patients to reveal the microenvironmental differences between primary and rNPC. Specific MCAM cancer-associated fibroblasts are significantly enriched in rNPC, where they promote tumor radioresistance through the collagen IV-ITGA2-FAK-AKT axis. Furthermore, we found that collagen IV suppresses the infiltration of T cells, and we identified mechanisms of immune escape in rNPC. We uncovered the presence and function of CD8 ZNF683 cells in rNPC with lower cytotoxicity. The abundance of B cells and tertiary lymphoid structures significantly diminishes in rNPC. Finally, we confirmed that CD47-SIRPα commonly existed between myeloid and malignant cells in rNPC. This study provides an in-depth understanding of the mechanism of radioresistance and immune evasion in rNPC as well as highlighting critical preliminary targets for curing rNPC.

摘要

放射治疗抵抗和免疫逃逸是复发性鼻咽癌(rNPC)的突出特征。然而,它们的机制仍未完全明确。在此,我们对24例患者的39个肿瘤进行了单细胞和空间转录组学分析,以揭示原发性和复发性鼻咽癌之间的微环境差异。特定的MCAM癌症相关成纤维细胞在复发性鼻咽癌中显著富集,它们通过IV型胶原-整合素α2-黏着斑激酶-蛋白激酶B轴促进肿瘤的放射抗性。此外,我们发现IV型胶原抑制T细胞浸润,并确定了复发性鼻咽癌的免疫逃逸机制。我们发现细胞毒性较低的复发性鼻咽癌中存在CD8 ZNF683细胞并明确了其功能。复发性鼻咽癌中B细胞和三级淋巴结构的丰度显著降低。最后,我们证实CD47-信号调节蛋白α在复发性鼻咽癌的髓系细胞和恶性细胞之间普遍存在。本研究深入了解了复发性鼻咽癌的放射抗性和免疫逃逸机制,并突出了治愈复发性鼻咽癌的关键初步靶点。

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本文引用的文献

1
ZNF683 marks a CD8 T cell population associated with anti-tumor immunity following anti-PD-1 therapy for Richter syndrome.ZNF683 标记了一组 CD8 T 细胞,其与利妥昔单抗联合 PD-1 治疗复发性/难治性弥漫大 B 细胞淋巴瘤(Richter 综合征)后的抗肿瘤免疫有关。
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Hyperfractionation compared with standard fractionation in intensity-modulated radiotherapy for patients with locally advanced recurrent nasopharyngeal carcinoma: a multicentre, randomised, open-label, phase 3 trial.局部晚期复发性鼻咽癌患者调强放疗中加速分割与标准分割的比较:一项多中心、随机、开放标签的3期试验
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Camrelizumab Plus Apatinib in Patients With Recurrent or Metastatic Nasopharyngeal Carcinoma: An Open-Label, Single-Arm, Phase II Study.卡瑞利珠单抗联合阿帕替尼治疗复发或转移性鼻咽癌患者的开放标签、单臂、Ⅱ期研究。
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Estimation of cell lineages in tumors from spatial transcriptomics data.基于空间转录组学数据估算肿瘤中的细胞谱系。
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Interferon-dependent SLC14A1 cancer-associated fibroblasts promote cancer stemness via WNT5A in bladder cancer.干扰素依赖的 SLC14A1 癌症相关成纤维细胞通过 WNT5A 在膀胱癌中促进癌症干性。
Cancer Cell. 2022 Dec 12;40(12):1550-1565.e7. doi: 10.1016/j.ccell.2022.11.005. Epub 2022 Dec 1.
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Liver tumour immune microenvironment subtypes and neutrophil heterogeneity.肝肿瘤免疫微环境亚型与中性粒细胞异质性
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7
Galunisertib plus neoadjuvant chemoradiotherapy in patients with locally advanced rectal cancer: a single-arm, phase 2 trial.加鲁尼西替布联合新辅助放化疗治疗局部晚期直肠癌患者:一项单臂2期试验
Lancet Oncol. 2022 Sep;23(9):1189-1200. doi: 10.1016/S1470-2045(22)00446-6. Epub 2022 Aug 8.
8
Oncogenic collagen I homotrimers from cancer cells bind to α3β1 integrin and impact tumor microbiome and immunity to promote pancreatic cancer.肿瘤细胞的致癌性胶原 I 同源三聚体与 α3β1 整合素结合,影响肿瘤微生物组和免疫,促进胰腺癌。
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9
Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data.单细胞 RNA-Seq 数据中细胞间通讯推断方法和资源的比较。
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The theory of tumor ecosystem.肿瘤生态系统理论。
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