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单细胞和空间转录组分析揭示了与鼻咽癌肿瘤进展和免疫治疗反应相关的三级淋巴结构。

Single-cell and spatial transcriptome analyses reveal tertiary lymphoid structures linked to tumour progression and immunotherapy response in nasopharyngeal carcinoma.

机构信息

State Key Laboratory of Oncology in South China, Guangdong Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-sen University Cancer Center, Guangzhou, 510060, P. R. China.

The Eighth Affiliated Hospital, Sun Yat-sen University, Shenzhen, 518033, P. R. China.

出版信息

Nat Commun. 2024 Sep 4;15(1):7713. doi: 10.1038/s41467-024-52153-4.

DOI:10.1038/s41467-024-52153-4
PMID:39231979
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11375053/
Abstract

Tertiary lymphoid structures are immune cell aggregates linked with cancer outcomes, but their interactions with tumour cell aggregates are unclear. Using nasopharyngeal carcinoma as a model, here we analyse single-cell transcriptomes of 343,829 cells from 77 biopsy and blood samples and spatially-resolved transcriptomes of 31,316 spots from 15 tumours to decipher their components and interactions with tumour cell aggregates. We identify essential cell populations in tertiary lymphoid structure, including CXCL13 cancer-associated fibroblasts, stem-like CXCL13CD8 T cells, and B and T follicular helper cells. Our study shows that germinal centre reaction matures plasma cells. These plasma cells intersperse with tumour cell aggregates, promoting apoptosis of EBV-related malignant cells and enhancing immunotherapy response. CXCL13 cancer-associated fibroblasts promote B cell adhesion and antibody production, activating CXCL13CD8 T cells that become exhausted in tumour cell aggregates. Tertiary lymphoid structure-related cell signatures correlate with prognosis and PD-1 blockade response, offering insights for therapeutic strategies in cancers.

摘要

三级淋巴结构是与癌症结局相关的免疫细胞聚集物,但它们与肿瘤细胞聚集物的相互作用尚不清楚。在这里,我们使用鼻咽癌作为模型,分析了来自 77 个活检和血液样本的 343829 个细胞的单细胞转录组和来自 15 个肿瘤的 31316 个点的空间分辨转录组,以破译它们的组成成分及其与肿瘤细胞聚集物的相互作用。我们鉴定了三级淋巴结构中的重要细胞群体,包括 CXCL13 癌相关成纤维细胞、具有干细胞样特性的 CXCL13+CD8 T 细胞以及 B 和 T 滤泡辅助细胞。我们的研究表明,生发中心反应使浆细胞成熟。这些浆细胞与肿瘤细胞聚集物交错存在,促进 EBV 相关恶性细胞的凋亡,并增强免疫治疗反应。CXCL13 癌相关成纤维细胞促进 B 细胞黏附与抗体产生,激活 CXCL13+CD8 T 细胞,使其在肿瘤细胞聚集物中耗竭。与三级淋巴结构相关的细胞特征与预后和 PD-1 阻断反应相关,为癌症的治疗策略提供了新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e7f/11375053/10105fca1445/41467_2024_52153_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e7f/11375053/35243ea1e568/41467_2024_52153_Fig1_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e7f/11375053/b30a5f2020c5/41467_2024_52153_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e7f/11375053/4f4d4127c2c9/41467_2024_52153_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e7f/11375053/49deac07ca4c/41467_2024_52153_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e7f/11375053/050ccf4f0d49/41467_2024_52153_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e7f/11375053/339a6be0c7de/41467_2024_52153_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e7f/11375053/10105fca1445/41467_2024_52153_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e7f/11375053/35243ea1e568/41467_2024_52153_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e7f/11375053/82cae349667e/41467_2024_52153_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e7f/11375053/b30a5f2020c5/41467_2024_52153_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e7f/11375053/4f4d4127c2c9/41467_2024_52153_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e7f/11375053/49deac07ca4c/41467_2024_52153_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e7f/11375053/050ccf4f0d49/41467_2024_52153_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e7f/11375053/339a6be0c7de/41467_2024_52153_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e7f/11375053/10105fca1445/41467_2024_52153_Fig8_HTML.jpg

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