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本文引用的文献

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Multi-ancestry study of the genetics of problematic alcohol use in over 1 million individuals.多血统个体超过 100 万人的问题性饮酒使用的遗传学研究。
Nat Med. 2023 Dec;29(12):3184-3192. doi: 10.1038/s41591-023-02653-5. Epub 2023 Dec 7.
2
Genetic Underpinnings of the Transition From Alcohol Consumption to Alcohol Use Disorder: Shared and Unique Genetic Architectures in a Cross-Ancestry Sample.从饮酒到酒精使用障碍的转变的遗传基础:跨血统样本中的共享和独特遗传结构。
Am J Psychiatry. 2023 Aug 1;180(8):584-593. doi: 10.1176/appi.ajp.21090892. Epub 2023 Jun 7.
3
Does polygenic risk for substance-related traits predict ages of onset and progression of symptoms?多基因风险与物质相关特质是否能预测症状的发病年龄和进展?
Addiction. 2023 Sep;118(9):1675-1686. doi: 10.1111/add.16210. Epub 2023 May 11.
4
Prediction of type 2 diabetes using genome-wide polygenic risk score and metabolic profiles: A machine learning analysis of population-based 10-year prospective cohort study.基于全基因组多基因风险评分和代谢谱预测 2 型糖尿病:基于人群的 10 年前瞻性队列研究的机器学习分析。
EBioMedicine. 2022 Dec;86:104383. doi: 10.1016/j.ebiom.2022.104383. Epub 2022 Nov 30.
5
Phenome-wide Association Analysis of Substance Use Disorders in a Deeply Phenotyped Sample.在一个深度表型化样本中对物质使用障碍的全表型关联分析。
Biol Psychiatry. 2023 Mar 15;93(6):536-545. doi: 10.1016/j.biopsych.2022.08.010. Epub 2022 Aug 18.
6
Using machine learning to determine the shared and unique risk factors for marijuana use among child-welfare versus community adolescents.使用机器学习确定儿童福利与社区青少年中大麻使用的共同和独特风险因素。
PLoS One. 2022 Sep 21;17(9):e0274998. doi: 10.1371/journal.pone.0274998. eCollection 2022.
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Using machine learning to predict heavy drinking during outpatient alcohol treatment.利用机器学习预测门诊酒精治疗期间的重度饮酒情况。
Alcohol Clin Exp Res. 2022 Apr;46(4):657-666. doi: 10.1111/acer.14802. Epub 2022 Apr 14.
8
Association of Habitual Alcohol Intake With Risk of Cardiovascular Disease.习惯性饮酒与心血管疾病风险的关联。
JAMA Netw Open. 2022 Mar 1;5(3):e223849. doi: 10.1001/jamanetworkopen.2022.3849.
9
Evaluating risk for alcohol use disorder: Polygenic risk scores and family history.评估酒精使用障碍风险:多基因风险评分和家族史。
Alcohol Clin Exp Res. 2022 Mar;46(3):374-383. doi: 10.1111/acer.14772. Epub 2022 Mar 10.
10
Understanding low treatment seeking rates for alcohol use disorder: A narrative review of the literature and opportunities for improvement.理解酒精使用障碍治疗寻求率低的问题:文献回顾与改进机会的叙述性评论。
Am J Drug Alcohol Abuse. 2021 Nov 2;47(6):664-679. doi: 10.1080/00952990.2021.1969658. Epub 2021 Aug 31.

在一个深度表型样本中,使用多基因评分和机器学习预测酒精使用障碍的治疗寻求状态。

Predicting treatment-seeking status for alcohol use disorder using polygenic scores and machine learning in a deeply-phenotyped sample.

作者信息

Jinwala Zeal, Green ReJoyce, Khan Yousef, Gelernter Joel, Kember Rachel L, Hartwell Emily E

机构信息

Crescenz VA Medical Center, Philadelphia, PA 19104, United States; Department of Psychiatry, University of Pennsylvania, Philadelphia, PA 19104, United States.

Medical University of South Carolina, Charleston, SC 29425, United States.

出版信息

Drug Alcohol Depend. 2025 Sep 1;274:112797. doi: 10.1016/j.drugalcdep.2025.112797. Epub 2025 Jul 16.

DOI:10.1016/j.drugalcdep.2025.112797
PMID:40695097
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12447308/
Abstract

BACKGROUND

Few individuals with alcohol use disorder (AUD) receive treatment. Previous studies have shown drinking behavior, psychological problems, and substance dependence to predict treatment seeking. However, to date, no studies have incorporated polygenic scores (PGS), a measure of genetic risk for AUD.

METHODS

In a deeply-phenotyped sample, we identified 9103 individuals diagnosed with DSM-IV AUD and indicated treatment-seeking status. We implemented a random forest (RF) model to predict treatment-seeking based on 91 clinically relevant phenotypes. We calculated AUD PGS for those with genetic data (African ancestry [AFR] n = 3192, European ancestry [EUR] n = 3553) and generated RF models for each ancestry group, first without and then with PGS. Lastly, we developed models stratified by age (< and ≥40 years old).

RESULTS

66.6 % reported treatment seeking (M=40.0, 62.4 % male). Across models, top predictors included years of alcohol use and related psychological problems, psychiatric diagnoses, and heart disease. In the models without PGS, we found 77.6 % accuracy and 0.829 AUC for EUR and 75.1 % and 0.770 for AFR; the addition of PGS did not substantially change these metrics. PGS was the 9th most important predictor for EUR and 28th for AFR. In the age-stratified analysis, PGS ranked 8th for < 40 and 34th for ≥ 40 in EUR ancestry, and it ranked 70th for < 40 and 78th for ≥ 40 in the AFR sample.

CONCLUSION

Alcohol use, psychiatric issues, and comorbid medical disorders were predictors of treatment seeking. Incorporating PGS did not substantially alter performance, but was a more important predictor in younger individuals with AUD.

摘要

背景

很少有酒精使用障碍(AUD)患者接受治疗。先前的研究表明,饮酒行为、心理问题和物质依赖可预测治疗寻求情况。然而,迄今为止,尚无研究纳入多基因评分(PGS),这是一种衡量AUD遗传风险的指标。

方法

在一个深度表型样本中,我们识别出9103名被诊断为DSM-IV AUD并表明治疗寻求状态的个体。我们实施了一个随机森林(RF)模型,以基于91种临床相关表型预测治疗寻求情况。我们为有遗传数据的个体(非洲血统[AFR] n = 3192,欧洲血统[EUR] n = 3553)计算了AUD PGS,并为每个血统组生成了RF模型,首先不使用PGS,然后使用PGS。最后,我们开发了按年龄分层(<40岁和≥40岁)的模型。

结果

66.6%的人报告寻求治疗(M = 40.0,62.4%为男性)。在所有模型中,最重要的预测因素包括饮酒年限和相关心理问题、精神疾病诊断以及心脏病。在不使用PGS的模型中,我们发现欧洲血统组的准确率为77.6%,AUC为0.829,非洲血统组的准确率为75.1%,AUC为0.770;添加PGS并没有显著改变这些指标。PGS在欧洲血统组中是第9重要的预测因素,在非洲血统组中是第28重要的预测因素。在年龄分层分析中,在欧洲血统中,PGS在<40岁组中排名第8,在≥40岁组中排名第34;在非洲血统样本中,它在<40岁组中排名第70,在≥40岁组中排名第78。

结论

饮酒、精神问题和合并的医学疾病是治疗寻求的预测因素。纳入PGS并没有显著改变模型性能,但在年轻的AUD患者中是一个更重要的预测因素。