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利用蛋白质-染料杂化物分子内加成反应设计抗原靶向荧光探针。

Design of Antigen-Targeting Fluorogenic Probes Utilizing Intramolecular Addition Reaction of Protein-Dye Hybrids.

作者信息

Nakadate Mamiko, Kojima Ryosuke, Seike Naoki, Tachibana Ryo, Fujita Kyohhei, Tsuchiya Reiko, Kamiya Mako, Plückthun Andreas, Urano Yasuteru

机构信息

Graduate School of Medicine, The University of Tokyo, Tokyo 113-0033, Japan.

Graduate School of Pharmaceutical Sciences, The University of Tokyo, Tokyo 113-0033, Japan.

出版信息

J Am Chem Soc. 2025 Aug 27;147(34):30684-30693. doi: 10.1021/jacs.5c04193. Epub 2025 Jul 23.

DOI:10.1021/jacs.5c04193
PMID:40701174
Abstract

Fluorogenic probes for antigens are useful for various purposes, including medical diagnostics and imaging, but achieving a rapid, large fluorescence increase is difficult. Here, we report a new class of fluorogenic probes for antigens based on a conjugate of an antibody-mimetic DARPin bearing a site-specifically incorporated cysteine and silicon-pyronine (SiP), which reacts reversibly with thiols. By using a library-screening approach, we found that the fluorescence of SiP conjugated to a DARPin is quenched via π-deconjugating addition reaction of the cysteine installed in the DARPin to SiP. Upon antigen binding, the equilibrium of this reaction is shifted to dissociation, restoring π-conjugation in the SiP and resulting in a large increase in fluorescence. As proof of concept of this chemical design principle, we constructed fluorogenic probes targeting GFP and EpCAM, which showed 25- and 12-fold fluorescence increases upon binding, respectively. The latter probe enabled wash-free cancer cell imaging with a low background.

摘要

用于抗原的荧光探针可用于多种目的,包括医学诊断和成像,但要实现快速、大幅的荧光增强却很困难。在此,我们报告了一类基于结合了位点特异性掺入半胱氨酸的模拟抗体DARPin和硅芘(SiP)的新型抗原荧光探针,SiP可与硫醇发生可逆反应。通过文库筛选方法,我们发现与DARPin偶联的SiP的荧光通过DARPin中安装的半胱氨酸与SiP的π-去共轭加成反应而猝灭。抗原结合后,该反应的平衡向解离方向移动,恢复SiP中的π-共轭,导致荧光大幅增加。作为这种化学设计原理的概念验证,我们构建了靶向绿色荧光蛋白(GFP)和上皮细胞黏附分子(EpCAM)的荧光探针,它们在结合时分别显示出25倍和12倍的荧光增强。后一种探针能够在低背景下实现免洗癌细胞成像。

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本文引用的文献

1
Activity-Based Fluorescence Diagnostics for Cancer.基于活性的荧光诊断癌症。
Chem Rev. 2024 Apr 10;124(7):4021-4078. doi: 10.1021/acs.chemrev.3c00612. Epub 2024 Mar 22.
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Protease Activated Probes for Real-Time Ratiometric Imaging of Solid Tumors.用于实体瘤实时比率成像的蛋白酶激活探针
ACS Cent Sci. 2023 May 4;9(5):1059-1069. doi: 10.1021/acscentsci.3c00261. eCollection 2023 May 24.
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Cysteine Cathepsins in Breast Cancer: Promising Targets for Fluorescence-Guided Surgery.半胱氨酸组织蛋白酶在乳腺癌中的作用:荧光引导手术的有前途的靶点。
Mol Imaging Biol. 2023 Feb;25(1):58-73. doi: 10.1007/s11307-022-01768-4. Epub 2022 Aug 24.
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Development of a fluorescent probe library enabling efficient screening of tumour-imaging probes based on discovery of biomarker enzymatic activities.基于生物标志物酶活性的发现开发荧光探针库以实现肿瘤成像探针的高效筛选。
Chem Sci. 2022 Mar 21;13(16):4474-4481. doi: 10.1039/d1sc06889j. eCollection 2022 Apr 20.
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Detection of circulating tumor cells in blood of pancreatic ductal adenocarcinoma patients.胰腺导管腺癌患者血液中循环肿瘤细胞的检测
Cancer Drug Resist. 2020 Mar 19;3(1):83-97. doi: 10.20517/cdr.2019.73. eCollection 2020.
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Introducing Cysteines into Nanobodies for Site-Specific Labeling.引入半胱氨酸实现纳米抗体的定点标记。
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Molecular probes for fluorescence image-guided cancer surgery.用于荧光图像引导癌症手术的分子探针。
Curr Opin Chem Biol. 2022 Apr;67:102112. doi: 10.1016/j.cbpa.2021.102112. Epub 2022 Jan 19.
8
Activatable fluorescent probes for imaging of enzymes.可激活荧光探针用于酶的成像。
Chem Soc Rev. 2022 Jan 24;51(2):450-463. doi: 10.1039/d1cs00543j.
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Fundamentals and developments in fluorescence-guided cancer surgery.荧光引导癌症手术的基础与进展
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Systematic Tuning of Rhodamine Spirocyclization for Super-resolution Microscopy.罗丹明螺环化的系统调控用于超分辨率显微镜。
J Am Chem Soc. 2021 Sep 15;143(36):14592-14600. doi: 10.1021/jacs.1c05004. Epub 2021 Aug 30.