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蛋白质组学分析揭示了不同级别胶质瘤中囊泡运输的动态调控。

Proteomic profiling reveals dynamic regulation of vesicle trafficking across glioma grades.

作者信息

Pienkowski Tomasz, Mojsak Patrycja, Kowalczyk Tomasz, Cysewski Dominik, Krupa Mikolaj, Rutkowski Robert, Mariak Zenon, Godlewski Adrian, Reszec Joanna, Moniuszko Marcin, Kretowski Adam, Lyson Tomasz, Ciborowski Michal

机构信息

Metabolomics and Proteomics Laboratory, Clinical Research Centre, Medical University of Bialystok, M. Sklodowskiej-Curie 24A, Bialystok, 15-276, Poland.

Department of Neurosugery, Medical University of Bialystok, Bialystok, 15-276, Poland.

出版信息

J Neurooncol. 2025 Jul 24. doi: 10.1007/s11060-025-05151-5.

DOI:10.1007/s11060-025-05151-5
PMID:40705199
Abstract

PURPOSE

Gliomas are highly heterogeneous central nervous system tumors that evolve through progressive molecular reprogramming. While cell proliferation and adhesion mechanisms are well-characterized, the contribution of vesicle trafficking to glioma progression remains underexplored. This study aimed to characterize proteomic changes across glioma grades.

METHODS

We performed untargeted, quantitative proteomic profiling of glioma tissues across WHO grades I-IV using a combination of Tandem Mass Tag (TMT)-11plex labeling and high-resolution liquid chromatography-mass spectrometry (LC-MS). Tissue samples were processed using filter-aided sample preparation (FASP) and analyzed using a µPAC reverse-phase HPLC system coupled to a high-resolution mass spectrometer. Protein identification and quantification were conducted through database searching and validated against stringent quality control criteria.

RESULTS

We identified over 4,400 proteins across samples, revealing dynamic, grade-specific shifts in vesicle trafficking. Grade II gliomas showed upregulation of exocytic proteins (e.g., synaptotagmin, syntaxin, clathrin) and suppression of dynamin, suggesting enhanced vesicular secretion. Grade III tumors exhibited the opposite trend-marked downregulation of exocytic components with concurrent activation of clathrin-mediated endocytosis. Grade IV gliomas displayed a hybrid profile, with partial reactivation of exocytic machinery alongside sustained endocytic activity, indicative of vesicular plasticity.

CONCLUSION

This study highlights the synaptic vesicle cycle as a progressively remodeled pathway in glioma biology. Our findings suggest that vesicle trafficking is a critical, underrecognized feature of glioma pathogenesis and may represent a novel axis for therapeutic exploration.

摘要

目的

胶质瘤是高度异质性的中枢神经系统肿瘤,通过渐进性分子重编程演变。虽然细胞增殖和黏附机制已得到充分表征,但囊泡运输对胶质瘤进展的作用仍未得到充分探索。本研究旨在表征不同级别胶质瘤的蛋白质组学变化。

方法

我们使用串联质谱标签(TMT)-11重标记和高分辨率液相色谱-质谱联用(LC-MS)相结合的方法,对世界卫生组织(WHO)I-IV级的胶质瘤组织进行了非靶向定量蛋白质组分析。组织样本采用滤膜辅助样品制备(FASP)方法处理,并使用与高分辨率质谱仪联用的µPAC反相高效液相色谱系统进行分析。通过数据库搜索进行蛋白质鉴定和定量,并根据严格的质量控制标准进行验证。

结果

我们在样本中鉴定出4400多种蛋白质,揭示了囊泡运输中动态的、特定级别的变化。II级胶质瘤显示胞吐蛋白(如突触结合蛋白、 syntaxin、网格蛋白)上调,动力蛋白受到抑制,提示囊泡分泌增强。III级肿瘤呈现相反的趋势——胞吐成分明显下调,同时网格蛋白介导的内吞作用激活。IV级胶质瘤表现出混合特征,胞吐机制部分重新激活,同时内吞活性持续存在,表明囊泡具有可塑性。

结论

本研究强调突触囊泡循环是胶质瘤生物学中一个逐渐重塑的途径。我们的研究结果表明,囊泡运输是胶质瘤发病机制中一个关键但未被充分认识的特征,可能代表了一个新的治疗探索轴。

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本文引用的文献

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Characterizing the molecular and spatial heterogeneity of midline gliomas in adults: a single institution analysis.成人中线胶质瘤的分子和空间异质性特征:单机构分析
J Neurooncol. 2025 Jun;173(2):369-381. doi: 10.1007/s11060-025-04994-2. Epub 2025 Mar 6.
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V-ATPase in glioma stem cells: a novel metabolic vulnerability.胶质瘤干细胞中的V-ATP酶:一种新的代谢脆弱性。
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Construction and validation of a risk model based on the key SNARE proteins to predict the prognosis and immune microenvironment of gliomas.
基于关键SNARE蛋白构建和验证风险模型以预测胶质瘤的预后和免疫微环境
Front Mol Neurosci. 2023 Dec 5;16:1304224. doi: 10.3389/fnmol.2023.1304224. eCollection 2023.
4
Unconventional Protein Secretion in Brain Tumors Biology: Enlightening the Mechanisms for Tumor Survival and Progression.脑肿瘤生物学中的非传统蛋白质分泌:揭示肿瘤存活和进展的机制
Front Cell Dev Biol. 2022 Jun 15;10:907423. doi: 10.3389/fcell.2022.907423. eCollection 2022.
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A novel ferroptosis-related gene signature associated with cell cycle for prognosis prediction in patients with clear cell renal cell carcinoma.一个与细胞周期相关的新型铁死亡相关基因特征,可用于预测透明细胞肾细胞癌患者的预后。
BMC Cancer. 2022 Jan 3;22(1):1. doi: 10.1186/s12885-021-09033-7.
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Single-cell multimodal glioma analyses identify epigenetic regulators of cellular plasticity and environmental stress response.单细胞多模态脑胶质瘤分析鉴定细胞可塑性和环境应激反应的表观遗传调控因子。
Nat Genet. 2021 Oct;53(10):1456-1468. doi: 10.1038/s41588-021-00926-8. Epub 2021 Sep 30.
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Lysosomes in glioblastoma: pump up the volume.胶质母细胞瘤中的溶酶体:增大音量。
Cell Cycle. 2020 Sep;19(17):2094-2104. doi: 10.1080/15384101.2020.1796016. Epub 2020 Jul 29.
8
Quantitative proteomics reveals reduction of endocytic machinery components in gliomas.定量蛋白质组学揭示了神经胶质瘤中内吞机制成分的减少。
EBioMedicine. 2019 Aug;46:32-41. doi: 10.1016/j.ebiom.2019.07.039. Epub 2019 Jul 19.
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