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计算机辅助发现作为靶向双特异性酪氨酸磷酸化调节激酶1A的神经保护剂的三唑并噻二唑类化合物。

Computer-aided discovery of triazolothiadiazoles as DYRK1A-targeted neuroprotective agents.

作者信息

Si Xinxin, Wang Yaling, Qiu Nianzhuang, Qian Chenliang, Yang Bochao, Jin Hongwei, Wang Hao, Zhang Xuehui, Xia Jie

机构信息

School of Pharmacy, Jiangsu Ocean University Lianyungang 222005 China.

State Key Laboratory of Bioactive Substance and Function of Natural Medicines, Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College Beijing 100050 China

出版信息

RSC Med Chem. 2025 Jul 14. doi: 10.1039/d5md00289c.

Abstract

Dual-specificity tyrosine phosphorylation-regulated kinase 1A (DYRK1A) is a promising target for drug discovery against neurological diseases. So far, no DYRK1A inhibitor has been approved for clinical use, partly due to the lack of effective and safe chemotypes. In this study, by using a computer-aided drug design strategy and DYRK1A inhibition assay, we were able to identify a novel DYRK1A inhibitor, , compound Y16-5 (Specs ID: ) with an IC value of 0.29 μM. The molecular docking and molecular dynamics simulations uncovered the binding details of compound Y16-5 that included hydrogen bonds with Leu241, Lys188 and Lys167. According to the kinome analysis, compound Y16-5 was highly selective to DYRK1A. Further cell-based assays have shown that compound Y16-5 could protect human neuroblastoma cell line SH-SY5Y from okadaic acid (OA)-induced injury. In terms of the molecular mechanism, compound Y16-5 decreased tau (pSer396)/tau and Aβ protein expression highly related to Alzheimer's disease. Further druglikeness evaluation has demonstrated that (1) compound Y16-5 was not toxic to SH-SY5Y and HL-7702 cells (CC > 100 μM), and (2) compound Y16-5 could permeate the blood-brain-barrier, with a permeability value of 31.52 (×10 cm s). Taken together, we have discovered a potent DYRK1A inhibitor Y16-5 with neuroprotective activity by screening and bioassays.

摘要

双特异性酪氨酸磷酸化调节激酶1A(DYRK1A)是治疗神经疾病药物研发的一个有前景的靶点。到目前为止,尚无DYRK1A抑制剂获批用于临床,部分原因是缺乏有效且安全的化学类型。在本研究中,通过使用计算机辅助药物设计策略和DYRK1A抑制试验,我们得以鉴定出一种新型DYRK1A抑制剂,即化合物Y16 - 5(斯贝克司编号: ),其IC值为0.29 μM。分子对接和分子动力学模拟揭示了化合物Y16 - 5的结合细节,包括与Leu241、Lys188和Lys167形成氢键。根据激酶组分析,化合物Y16 - 5对DYRK1A具有高度选择性。进一步的细胞试验表明,化合物Y16 - 5可保护人神经母细胞瘤细胞系SH - SY5Y免受冈田酸(OA)诱导的损伤。就分子机制而言,化合物Y16 - 5降低了与阿尔茨海默病高度相关的tau(pSer396)/tau和Aβ蛋白表达。进一步的类药性质评估表明:(1)化合物Y16 - 5对SH - SY5Y和HL - 7702细胞无毒(CC>100 μM);(2)化合物Y16 - 5可透过血脑屏障,通透率值为31.52(×10 cm s)。综上所述,我们通过筛选和生物测定发现了一种具有神经保护活性的强效DYRK1A抑制剂Y16 - 5。

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