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一个细胞命运图谱模拟实验室,以增进本科生对青蛙、斑马鱼和被囊动物胚胎早期发育过程的理解。

A cell fate mapping simulation laboratory to increase undergraduate students' understanding of early developmental processes in frog, zebrafish, and tunicate embryos.

作者信息

Sarpal Ritu, Bruce Ashley E E, Skromne Isaac

机构信息

Department of Cell and Systems Biology, University of Toronto, Toronto, Ontario, Canada.

Department of Biology, University of Richmond, Richmond, Virginia, USA.

出版信息

J Microbiol Biol Educ. 2025 Aug 21;26(2):e0010425. doi: 10.1128/jmbe.00104-25. Epub 2025 Jul 31.

Abstract

Fate mapping is an essential technique in developmental biology that allows researchers to track the future identity or "fate" of embryonic cells in an organism. However, the experimental procedure for constructing fate maps is tedious, time-consuming, and technically challenging, making it difficult to incorporate as an undergraduate lab experience. Here, we describe a hands-on undergraduate laboratory activity that allows students to generate and examine model organisms' fate maps, employing a free, user-friendly web-based app, FatemapApp (http://fatemapapp.com/). Students used the app to construct the fate maps for the 32-cell stage frog embryo, the gastrula stage zebrafish embryo, and the 76-cell stage tunicate embryo. Individual analysis of the maps allows students to identify the potential of cells to contribute to one or multiple tissues and their probability of moving and mixing with the neighboring cells. Subsequently, cross-species comparative analysis allows students to infer tissue organization across chordate and vertebrate embryos that may be evolutionarily conserved. Surveys showed that the students found this activity engaging and valuable, reporting a deeper understanding of the rationale, methodology, and outcomes underlying the construction of fate maps. Furthermore, students reported increased comprehension of embryonic development and its processes.

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2085/12369337/cdd2e09ae333/jmbe.00104-25.f001.jpg

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