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使用Sepsityper试剂盒时影响低鉴定率和光谱质量的因素的实验研究

Experimental study on factors influencing low identification rates and spectral quality of using the Sepsityper kit.

作者信息

Choi Hyunseul, Kang Minhee, Ko You-Keun, Yu Hui-Jin, Kim Tae Yeul, Huh Hee Jae, Lee Nam Yong, Lee Hyun-Seung

机构信息

Biomedical Engineering Research Center, Smart Healthcare Research Institute, Samsung Medical Center, Seoul, Republic of Korea.

Department of Laboratory Medicine and Genetics, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Republic of Korea.

出版信息

Microbiol Spectr. 2025 Sep 2;13(9):e0108425. doi: 10.1128/spectrum.01084-25. Epub 2025 Jul 31.

Abstract

The MBT Sepsityper Kit (Sepsityper) has a low identification rate for , and the underlying causes remain unclear. To elucidate these factors, we investigated five factors under controlled conditions simulating bloodstream infections: blood culture bottle type, blood culture system, matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) platform, lysis buffer volume used in Sepsityper, and sample preparation method used for MALDI-TOF MS analysis. The results showed that anaerobic bottles had a higher identification rate than aerobic bottles (5.6% vs 0%); however, no significant differences were observed for other factors. Replacement of the lysis and washing buffers with phosphate-buffered saline (PBS) in the Sepsityper was also performed. Replacing the lysis buffer with PBS improved the identification rates compared to unmodified protocols or replacing only the washing buffer. Groups without the lysis buffer exhibited typical gram-positive morphology on Gram staining, whereas those with the lysis buffer showed predominantly swollen gram-negative morphology. Further evaluations of blood culture bottle types (aerobic vs anaerobic), blood culture systems (BD BACTEC FX vs BACT/ALERT VIRTUO), MALDI-TOF MS platforms (MALDI Biotyper sirius vs VITEK MS), lysis buffer volumes used in Sepsityper (standard vs half volume), and sample preparation methods for MALDI-TOF MS analysis (direct transfer, extended direct transfer, and full extraction) revealed no significant differences in identification rates. These findings suggest that the lysis buffer plays a critical role in the poor identification rate of using Sepsityper; however, halving its volume does not significantly improve the outcomes.IMPORTANCEThis study addresses a critical issue in clinical microbiology: the low identification rate of using the widely used Sepsityper for matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Accurate and timely identification of is essential for diagnosing invasive pneumococcal infections, which are associated with high morbidity and mortality rates. Our findings revealed that the lysis buffer in the Sepsityper significantly damaged the bacterial cell wall, leading to low identification rates for specifically. Replacing the lysis and washing buffers with a phosphate-buffered saline solution markedly improved the identification accuracy, offering a potential workaround. This study highlights the need for further refinement of diagnostic protocols for and underscores the importance of alternative enrichment methods to improve clinical outcomes. These findings have significant implications for laboratory and patient care worldwide.

摘要

MBT脓毒症分型试剂盒(Sepsityper)对[具体细菌名称未给出]的鉴定率较低,其潜在原因尚不清楚。为阐明这些因素,我们在模拟血流感染的受控条件下研究了五个因素:血培养瓶类型、血培养系统、基质辅助激光解吸/电离飞行时间质谱(MALDI-TOF MS)平台、Sepsityper中使用的裂解缓冲液体积以及用于MALDI-TOF MS分析的样品制备方法。结果表明,厌氧瓶的鉴定率高于需氧瓶(5.6%对0%);然而,其他因素未观察到显著差异。还在Sepsityper中用磷酸盐缓冲盐水(PBS)替代了裂解和洗涤缓冲液。与未修改的方案或仅更换洗涤缓冲液相比,用PBS替代裂解缓冲液提高了鉴定率。没有裂解缓冲液的组在革兰氏染色上呈现典型的革兰氏阳性形态,而有裂解缓冲液的组主要呈现肿胀的革兰氏阴性形态。对血培养瓶类型(需氧与厌氧)、血培养系统(BD BACTEC FX与BACT/ALERT VIRTUO)、MALDI-TOF MS平台(MALDI Biotyper sirius与VITEK MS)、Sepsityper中使用的裂解缓冲液体积(标准与半体积)以及MALDI-TOF MS分析的样品制备方法(直接转移、扩展直接转移和完全提取)的进一步评估显示,鉴定率没有显著差异。这些发现表明,裂解缓冲液在使用Sepsityper对[具体细菌名称未给出]鉴定率低方面起着关键作用;然而,将其体积减半并不能显著改善结果。重要性本研究解决了临床微生物学中的一个关键问题:使用广泛应用的Sepsityper进行基质辅助激光解吸/电离飞行时间质谱时对[具体细菌名称未给出]的鉴定率低。准确及时地鉴定[具体细菌名称未给出]对于诊断侵袭性肺炎球菌感染至关重要,侵袭性肺炎球菌感染与高发病率和死亡率相关。我们的发现表明,Sepsityper中的裂解缓冲液显著破坏了细菌细胞壁,导致对[具体细菌名称未给出]的鉴定率特别低。用磷酸盐缓冲盐溶液替代裂解和洗涤缓冲液显著提高了鉴定准确性,提供了一种潜在的解决方法。本研究强调了进一步完善对[具体细菌名称未给出]的诊断方案的必要性,并强调了替代富集方法对改善临床结果的重要性。这些发现对全球的实验室和患者护理具有重要意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4939/12403568/bbefcdb00ea4/spectrum.01084-25.f001.jpg

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