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用于多种分枝杆菌中简单靶向基因缺失的无诱导重组工程

Induction-free recombineering for simple targeted gene-deletions in various mycobacteria.

作者信息

Bracha Yahav, Barkan Daniel

机构信息

The Koret School of Veterinary Medicine, Robert H. Smith Faculty for Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel.

出版信息

Microbiol Spectr. 2025 Sep 2;13(9):e0189725. doi: 10.1128/spectrum.01897-25. Epub 2025 Aug 4.

DOI:10.1128/spectrum.01897-25
PMID:40757815
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12403632/
Abstract

Gene deletion is a valuable tool for phenotypic characterization in bacteriology, but in mycobacteria, generating deletion mutants remains a cumbersome and time-consuming process. Here, we present a modification to the widely used recombineering method in mycobacteria. By expressing the recombineering-promoting proteins from a single-copy episomal plasmid, we could use a constitutive promotor. This approach eliminates the need for induction prior to electroporation of the targeting substrate (linear DNA fragment comprised of homologous regions to the gene of interest, flanking a selection marker), and shortens the subsequent plasmid curing process. We successfully demonstrated this method in , , .IMPORTANCEAlthough several techniques exist for generating gene-deletion mutants in mycobacteria, these procedures remain limited to laboratories more specialized in molecular biology. Here we present a very simplified procedure, which is a modification on a well-tried technique. Our proposed procedure makes genetic manipulation in mycobacteria more accessible to a greater number of researchers throughout the world, including those with less advanced molecular biology expertizse.

摘要

基因缺失是细菌学中用于表型特征鉴定的一种有价值的工具,但在分枝杆菌中,产生缺失突变体仍然是一个繁琐且耗时的过程。在此,我们对分枝杆菌中广泛使用的重组工程方法进行了改进。通过从单拷贝附加体质粒表达促进重组的蛋白,我们可以使用组成型启动子。这种方法消除了在电穿孔靶向底物(由与目标基因同源区域组成的线性DNA片段,两侧为选择标记)之前进行诱导的需要,并缩短了随后的质粒消除过程。我们在[具体菌种1]、[具体菌种2]、[具体菌种3]中成功证明了该方法。

重要性

尽管存在几种在分枝杆菌中产生基因缺失突变体的技术,但这些程序仍然局限于更擅长分子生物学的实验室。在此,我们提出了一种非常简化的程序,它是对一种经过充分验证的技术的改进。我们提出的程序使全世界更多的研究人员,包括那些分子生物学专业知识不太先进的研究人员,更容易进行分枝杆菌的基因操作。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9112/12403632/00ea265253d1/spectrum.01897-25.f004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9112/12403632/2fa6ea932260/spectrum.01897-25.f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9112/12403632/2dca8139ffde/spectrum.01897-25.f002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9112/12403632/f68db864b389/spectrum.01897-25.f003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9112/12403632/00ea265253d1/spectrum.01897-25.f004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9112/12403632/2fa6ea932260/spectrum.01897-25.f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9112/12403632/2dca8139ffde/spectrum.01897-25.f002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9112/12403632/f68db864b389/spectrum.01897-25.f003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9112/12403632/00ea265253d1/spectrum.01897-25.f004.jpg

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