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果蝇和哺乳动物中叶酸通过碳代谢对神经mRNA m⁶A甲基化组进行的全转录组调控。

Transcriptome-wide regulation of folate on neural mRNA mA methylome via carbon metabolism in Drosophila and mammals.

作者信息

Liu Anrui, Huo Zhengyi, Xu Zihe, Liu Sisi, Jiao Yuting, Li Rui, Lu Yi, Yang Meng, Huang Jia, Huang Chen, Wang Xiaoyun

机构信息

Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou, China.

School of Life Sciences, South China Normal University, Guangzhou, China.

出版信息

Commun Biol. 2025 Aug 4;8(1):1151. doi: 10.1038/s42003-025-08623-6.

DOI:10.1038/s42003-025-08623-6
PMID:40759722
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12321983/
Abstract

Increasing evidence shows that folate can regulate neural gene function through DNA modification, while regulatory roles of folate in neural RNA modification remain largely unknown. Here we show that folate treatment significantly increased Drosophila mRNA mA levels. RNA methylation analysis indicates that carbon metabolism pathways and neural pathways are the mainly affected pathways by folate. Folate can increase mRNA mA modification through carbon metabolic pathway in human cells, especially in neural cells. We also show that folate treatment can significantly increase the expression of mA-related proteins (METTL3, METTL14) and neural mRNA mA methylation levels in mice brain. Moreover, we find that folate-producing Lactobacillus plantarum can increase host mRNA mA modification after colonization. In conclusion, we demonstrate that folate participates in mRNA mA modification through carbon metabolic pathway in both Drosophila and mammals, and our results suggest that folate has a significant effect on neural-related genes and pathways.

摘要

越来越多的证据表明,叶酸可通过DNA修饰来调节神经基因功能,而叶酸在神经RNA修饰中的调节作用仍 largely未知。在此我们表明,叶酸处理显著提高了果蝇mRNA mA水平。RNA甲基化分析表明,碳代谢途径和神经途径是叶酸主要影响的途径。叶酸可通过碳代谢途径在人类细胞尤其是神经细胞中增加mRNA mA修饰。我们还表明,叶酸处理可显著提高小鼠大脑中mA相关蛋白(METTL3、METTL14)的表达以及神经mRNA mA甲基化水平。此外,我们发现产叶酸的植物乳杆菌在定殖后可增加宿主mRNA mA修饰。总之,我们证明叶酸在果蝇和哺乳动物中均通过碳代谢途径参与mRNA mA修饰,并且我们的结果表明叶酸对神经相关基因和途径具有显著影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/053d/12321983/ce947a572032/42003_2025_8623_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/053d/12321983/1a61a05e92fd/42003_2025_8623_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/053d/12321983/e4e1631f07aa/42003_2025_8623_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/053d/12321983/1da9a8f5e7b6/42003_2025_8623_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/053d/12321983/7a0579ac5bc3/42003_2025_8623_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/053d/12321983/3dfa218f6b99/42003_2025_8623_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/053d/12321983/f3cbc8f579f2/42003_2025_8623_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/053d/12321983/c317e2efe3a2/42003_2025_8623_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/053d/12321983/ce947a572032/42003_2025_8623_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/053d/12321983/1a61a05e92fd/42003_2025_8623_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/053d/12321983/e4e1631f07aa/42003_2025_8623_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/053d/12321983/1da9a8f5e7b6/42003_2025_8623_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/053d/12321983/7a0579ac5bc3/42003_2025_8623_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/053d/12321983/3dfa218f6b99/42003_2025_8623_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/053d/12321983/f3cbc8f579f2/42003_2025_8623_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/053d/12321983/c317e2efe3a2/42003_2025_8623_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/053d/12321983/ce947a572032/42003_2025_8623_Fig8_HTML.jpg

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本文引用的文献

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Microbiome-induced reprogramming in post-transcriptional landscape using nanopore direct RNA sequencing.基于纳米孔直接 RNA 测序的微生物组诱导的转录后景观重编程
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Antibiotic-Induced Gut Microbiota Dysbiosis Modulates Host Transcriptome and mA Epitranscriptome via Bile Acid Metabolism.抗生素诱导的肠道微生物失调通过胆汁酸代谢调节宿主转录组和 mA 表观转录组。
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