PoDCall: a robust tool for automated droplet classification in DNA-methylation droplet digital PCR.
作者信息
Brodal Hans Petter, Pharo Heidi, Vedeld Hege Marie, Lind Guro E
机构信息
Department of Molecular Oncology, Institute for Cancer Research, Norwegian Radium Hospital, Oslo University Hospital, Norway.
Department of Biosciences, Faculty of Mathematics and Natural Sciences, University of Oslo, Norway.
出版信息
Mol Oncol. 2025 Sep;19(9):2472-2473. doi: 10.1002/1878-0261.70105. Epub 2025 Aug 5.
Abstract
摘要
相似文献
1
PoDCall: a robust tool for automated droplet classification in DNA-methylation droplet digital PCR.PoDCall：一种用于DNA甲基化液滴数字PCR中自动液滴分类的强大工具。
Mol Oncol. 2025 Sep;19(9):2472-2473. doi: 10.1002/1878-0261.70105. Epub 2025 Aug 5.
2
PoDCall: positive droplet calling and normalization of droplet digital PCR DNA methylation data.PoDCall：用于液滴数字 PCR 甲基化数据的阳性液滴调用和标准化。
Bioinformatics. 2023 Jan 1;39(1). doi: 10.1093/bioinformatics/btac766.
3
A robust internal control for high-precision DNA methylation analyses by droplet digital PCR.通过液滴数字 PCR 实现高精度 DNA 甲基化分析的稳健内部控制。
Clin Epigenetics. 2018 Feb 21;10:24. doi: 10.1186/s13148-018-0456-5. eCollection 2018.
4
Comparative Analysis of Two Digital PCR Platforms for Detecting DNA Methylation in Patient Samples.用于检测患者样本中DNA甲基化的两种数字PCR平台的比较分析
Cell Biochem Funct. 2025 Aug;43(8):e70112. doi: 10.1002/cbf.70112.
5
A Novel Droplet Digital PCR Assay for BRCA1 and RAD51C Methylation: Advancing Homologous Recombination Deficiency Detection in Ovarian Cancer.
J Mol Diagn. 2025 Oct;27(10):1026-1036. doi: 10.1016/j.jmoldx.2025.07.002. Epub 2025 Aug 7.
6
Development and validation of a methylation-specific droplet digital PCR multiplex for lung cancer detection.用于肺癌检测的甲基化特异性液滴数字PCR多重检测方法的开发与验证
Sci Rep. 2025 Sep 2;15(1):32305. doi: 10.1038/s41598-025-15228-w.
7
Methylation-based droplet digital polymerase chain reaction shows high concordance with chronic lymphocytic leukemia IGHV somatic mutation status.基于甲基化的液滴数字聚合酶链反应与慢性淋巴细胞白血病IGHV体细胞突变状态高度一致。
Am J Clin Pathol. 2025 Jul 30. doi: 10.1093/ajcp/aqaf075.
8
Methylation-Specific Droplet Digital PCR: Testing a Novel Triage Tool for HrHPV-Positive Women in the Cervical Cancer Screening Program of Northern Portugal.甲基化特异性液滴数字PCR：在葡萄牙北部宫颈癌筛查项目中测试一种用于高危型人乳头瘤病毒阳性女性的新型分流工具。
MedComm (2020). 2025 Jun 15;6(7):e70203. doi: 10.1002/mco2.70203. eCollection 2025 Jul.
9
Application of droplet digital PCR for the detection of fish DNA in food products.液滴数字PCR在食品中鱼类DNA检测中的应用。
Food Res Int. 2025 Nov;219:117063. doi: 10.1016/j.foodres.2025.117063. Epub 2025 Jul 28.
10
Detection, quantitation, and genotyping of human papillomavirus circulating tumor DNA by droplet digital PCR.通过液滴数字PCR检测、定量和基因分型人乳头瘤病毒循环肿瘤DNA
J Clin Microbiol. 2025 Aug 19:e0058525. doi: 10.1128/jcm.00585-25.
本文引用的文献
1
Simultaneous detection of eight cancer types using a multiplex droplet digital PCR assay.使用多重液滴数字PCR分析法同时检测八种癌症类型。
Mol Oncol. 2025 Jan;19(1):188-203. doi: 10.1002/1878-0261.13708. Epub 2024 Sep 6.
2
Distinct longitudinal patterns of urine tumor DNA in patients undergoing surveillance for bladder cancer.膀胱癌监测患者尿液肿瘤 DNA 的纵向特征。
Mol Oncol. 2024 Nov;18(11):2684-2695. doi: 10.1002/1878-0261.13639. Epub 2024 May 8.
3
Digital PCR Partition Classification.数字PCR分区分类
Clin Chem. 2023 Sep 1;69(9):976-990. doi: 10.1093/clinchem/hvad063.
4
PoDCall: positive droplet calling and normalization of droplet digital PCR DNA methylation data.PoDCall：用于液滴数字 PCR 甲基化数据的阳性液滴调用和标准化。
Bioinformatics. 2023 Jan 1;39(1). doi: 10.1093/bioinformatics/btac766.
5
Early and accurate detection of cholangiocarcinoma in patients with primary sclerosing cholangitis by methylation markers in bile.通过胆汁中的甲基化标记物对原发性硬化性胆管炎患者胆管癌进行早期、准确的检测。
Hepatology. 2022 Jan;75(1):59-73. doi: 10.1002/hep.32125. Epub 2021 Dec 5.
Zotero 插件