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用于分子生物学分布式实践教学的开放教育资源。

Open educational resources for distributed hands-on teaching in molecular biology.

作者信息

Cerda Ariel, Aravena Alejandro, Zapata Valentina, Arce Anibal, Araya Wladimir, Gallardo Domingo, Aviles Javiera, Quero Francisco, Nuñez Isaac, Matute Tamara, Navarro Felipe, Ferrando Valentina, Blanco Marta, Velozo Sebastian, Rodriguez Sebastian, Aguilera Sebastian, Chateau Francisco, Olivares-Donoso Ruby, Molloy Jennifer C, Aidelberg Guy, Lindner Ariel B, Castro Fernando, Cremades Pablo, Ramirez-Sarmiento Cesar, Federici Fernan

机构信息

ANID - Millennium Science Initiative Program - Millennium Institute for Integrative Biology (iBio), Santiago, Chile.

Institute for Biological and Medical Engineering, Schools of Engineering, Medicine and Biological Sciences, Pontificia Universidad Católica de Chile, Santiago, Chile.

出版信息

PLoS One. 2025 Aug 5;20(8):e0327975. doi: 10.1371/journal.pone.0327975. eCollection 2025.

Abstract

The urgent need to develop a more equitable bioeconomy has positioned biotechnology capacity building at the forefront of international priorities. However, in many educational institutions, particularly in low- and middle-income countries, this remains a major challenge due to limited access to reagents, equipment, and technical documentation. In this work, we describe Open Educational Resources (OER) composed of locally produced biological reagents, open source hardware and free software to teach fundamental techniques in biotechnology such as LAMP DNA amplification, RT-PCR RNA detection, enzyme kinetics and fluorescence imaging. The use of locally produced reagents and devices reduces costs by up to one order of magnitude. During the pandemic lockdowns, these tools were distributed nationwide to students' homes as a lab-in-a-box for remote teaching of molecular biology. To test their performance, a total of 93 undergraduate students tested these resources during a biochemistry practical course. 27 out of 31 groups (87%) successfully achieved the objectives of the PCR activity, while 28 out of 31 groups (90%) correctly identified the target using LAMP reactions. To assess the potential application in secondary school, we organized three workshops for high school teachers from different institutions across Chile and performed an anonymous questionnaire, obtaining a strong agreement on how these OER broaden teachers' perspectives on the techniques and facilitate the teaching of molecular biology topics. This effort was made possible through a close collaboration with open source technology advocates and members of DIYbio communities, whose work is paving the way for low-cost training in biology. All the protocols and design files are available under open source licenses.

摘要

发展更公平的生物经济的迫切需求已将生物技术能力建设置于国际优先事项的前沿。然而,在许多教育机构,尤其是在低收入和中等收入国家,由于获取试剂、设备和技术文档的机会有限,这仍然是一项重大挑战。在这项工作中,我们描述了由本地生产的生物试剂、开源硬件和免费软件组成的开放教育资源(OER),用于教授生物技术的基本技术,如LAMP DNA扩增、RT-PCR RNA检测、酶动力学和荧光成像。使用本地生产的试剂和设备可将成本降低多达一个数量级。在疫情封锁期间,这些工具作为分子生物学远程教学的“盒中实验室”分发给全国各地学生的家中。为了测试其性能,共有93名本科生在生物化学实践课程中测试了这些资源。31个小组中有27个(约87%)成功实现了PCR活动的目标,而31个小组中有28个(约90%)使用LAMP反应正确识别了目标。为了评估在中学的潜在应用,我们为智利不同机构的高中教师组织了三次研讨会,并进行了匿名问卷调查,结果显示,对于这些开放教育资源如何拓宽教师对技术的视野以及促进分子生物学主题的教学,得到了强烈认可。通过与开源技术倡导者和DIYbio社区成员的密切合作,这项工作得以实现,他们的工作为低成本的生物学培训铺平了道路。所有协议和设计文件均根据开源许可提供。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01d7/12324123/5ca84a03462a/pone.0327975.g001.jpg

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