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一种L-岩藻糖响应转录因子交叉调节里氏木霉中多种碳水化合物活性酶的表达。

An l-fucose-responsive transcription factor cross-regulates the expression of a diverse array of carbohydrate-active enzymes in Trichoderma reesei.

作者信息

Zhao Qinqin, Gao Liwei, Xu Nuo, Zhang Xiuting, Qin Yuqi, Qu Yinbo, Liu Guodong

机构信息

State Key Laboratory of Microbial Technology, Shandong University, Qingdao, Shandong, China.

Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao, Shandong, China.

出版信息

PLoS Genet. 2025 Aug 11;21(8):e1011815. doi: 10.1371/journal.pgen.1011815. eCollection 2025 Aug.

DOI:10.1371/journal.pgen.1011815
PMID:40788923
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12370193/
Abstract

l-Fucose is a universal capping component of biomolecules found throughout all domains of life. Although fungi are renowned for their role in biomass recycling, the mechanisms by which they process l-fucose remain largely unknown. In this study, we elucidate a l-fucose-responsive system in Trichoderma reesei, a model fungus for plant cell wall degradation. Central to this system is the transcription factor FUR1, which is indispensable for growth on l-fucose. FUR1 orchestrates the expression of l-fucose catabolic enzymes, including an l-fucose dehydrogenase that exhibits distant homology to counterparts in bacteria and mammals. Through RNA sequencing and biochemical assays, we demonstrate that FUR1 also governs the enzymatic liberation of l-fucose by upregulating extracellular α-l-fucosidases. Intriguingly, FUR1 mediates l-fucose-triggered expression of a broad spectrum of enzymes that target diverse glycosidic bonds (e.g., β-glucuronidic, α-galactosidic, and β-xylosidic linkages) within complex carbohydrates. Expression of a constitutively active FUR1 mutant unlocked the production of otherwise silent glycosidases, substantially boosting the hydrolytic capacity of the fungal secretome on orange peel. These findings offer the first molecular insight into l-fucose sensing and metabolism in fungi, and advance our understanding of the fungal regulatory network for coordinated expression of biomass-degrading enzymes.

摘要

L-岩藻糖是一种普遍存在的生物分子封端成分,在生命的所有领域中都能找到。尽管真菌以其在生物质循环中的作用而闻名,但它们处理L-岩藻糖的机制在很大程度上仍不为人知。在本研究中,我们阐明了里氏木霉(一种用于植物细胞壁降解的模式真菌)中的L-岩藻糖响应系统。该系统的核心是转录因子FUR1,它对于在L-岩藻糖上生长是不可或缺的。FUR1协调L-岩藻糖分解代谢酶的表达,包括一种与细菌和哺乳动物中的对应物具有远缘同源性的L-岩藻糖脱氢酶。通过RNA测序和生化分析,我们证明FUR1还通过上调细胞外α-L-岩藻糖苷酶来控制L-岩藻糖的酶促释放。有趣的是,FUR1介导L-岩藻糖触发的一系列针对复杂碳水化合物中不同糖苷键(例如β-葡萄糖醛酸苷键、α-半乳糖苷键和β-木糖苷键)的酶的表达。组成型活性FUR1突变体的表达开启了原本沉默的糖苷酶的产生,显著提高了真菌分泌组对橙皮的水解能力。这些发现首次对真菌中L-岩藻糖的感知和代谢提供了分子见解,并推进了我们对真菌调节网络协调生物质降解酶表达的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2873/12370193/76666081829f/pgen.1011815.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2873/12370193/dd69c56b8d54/pgen.1011815.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2873/12370193/9037857ab45a/pgen.1011815.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2873/12370193/4199bd9702ca/pgen.1011815.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2873/12370193/f5a0ae19ac2e/pgen.1011815.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2873/12370193/747c31965dae/pgen.1011815.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2873/12370193/04a744cfd797/pgen.1011815.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2873/12370193/76666081829f/pgen.1011815.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2873/12370193/dd69c56b8d54/pgen.1011815.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2873/12370193/9037857ab45a/pgen.1011815.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2873/12370193/4199bd9702ca/pgen.1011815.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2873/12370193/f5a0ae19ac2e/pgen.1011815.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2873/12370193/747c31965dae/pgen.1011815.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2873/12370193/04a744cfd797/pgen.1011815.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2873/12370193/76666081829f/pgen.1011815.g007.jpg

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本文引用的文献

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Fungal impacts on Earth's ecosystems.真菌对地球生态系统的影响。
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InterPro: the protein sequence classification resource in 2025.InterPro:2025年的蛋白质序列分类资源。
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Transcriptomic and metabolic changes in Trichoderma reesei caused by mutation in xylanase regulator 1 (xyr1).木聚糖酶调节因子1(xyr1)突变引起的里氏木霉转录组和代谢变化
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Hydroxysteroid 17-β dehydrogenase 14 (HSD17B14) is an L-fucose dehydrogenase, the initial enzyme of the L-fucose degradation pathway.羟类固醇 17-β 脱氢酶 14(HSD17B14)是一种 L-岩藻糖脱氢酶,是 L-岩藻糖降解途径的初始酶。
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Identification and characterization of xyloglucan-degradation related α-1,2-l-fucosidase in Aspergillus oryzae.米曲霉中与木葡聚糖降解相关的α-1,2-L-岩藻糖苷酶的鉴定与特性分析
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