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转录组学在口腔癌研究中的作用。

Role of transcriptomics in the study of oral cancer.

作者信息

Natarajan Prabhu Manickam, Umapathy Vidhya Rekha

机构信息

Department of Clinical Sciences, Center of Medical and Bio-allied Health Sciences and Research, College of Dentistry, Ajman University, Ajman, United Arab Emirates.

Department of Dentistry, Sri Lalithambigai Medical College and Hospital, Dr.M.G.R. Educational and Research Institute, Chennai, Tamilnadu, India.

出版信息

Front Oral Health. 2025 Jul 28;6:1524364. doi: 10.3389/froh.2025.1524364. eCollection 2025.

DOI:10.3389/froh.2025.1524364
PMID:40791779
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12336142/
Abstract

Oral cancer, a formidable public health challenge, demands innovative approaches for early detection and effective treatment. This review explores the transformative role of transcriptomics in oral cancer research, leveraging cutting-edge technologies to decode the RNA landscape of tumors. We delve into RNA sequencing (RNA-seq), single-cell RNA sequencing (scRNA-seq), long non-coding RNA sequencing (lncRNA-seq), microarray analysis, and small RNA profiling, showcasing their unique contributions to unraveling the complexities of oral cancer. By mapping gene expression patterns, identifying biomarkers, and understanding tumor heterogeneity at an unprecedented resolution, transcriptomics offers powerful insights into the molecular mechanisms driving oral cancer. Furthermore, we highlight how these approaches pave the way for personalized medicine, enabling precise therapeutic interventions and innovative treatment strategies. The review also addresses the future directions and challenges in the field, emphasizing the need for advanced computational tools and interdisciplinary collaboration to fully harness the potential of transcriptomics in transforming oral cancer care.

摘要

口腔癌是一项严峻的公共卫生挑战,需要创新的早期检测和有效治疗方法。本综述探讨了转录组学在口腔癌研究中的变革性作用,利用前沿技术解码肿瘤的RNA图谱。我们深入研究了RNA测序(RNA-seq)、单细胞RNA测序(scRNA-seq)、长链非编码RNA测序(lncRNA-seq)、微阵列分析和小RNA谱分析,展示了它们在揭示口腔癌复杂性方面的独特贡献。通过以前所未有的分辨率绘制基因表达模式、识别生物标志物和了解肿瘤异质性,转录组学为驱动口腔癌的分子机制提供了有力见解。此外,我们强调了这些方法如何为个性化医疗铺平道路,实现精确的治疗干预和创新的治疗策略。本综述还讨论了该领域的未来方向和挑战,强调需要先进的计算工具和跨学科合作,以充分发挥转录组学在改变口腔癌护理方面的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/645e/12336142/5102720160b5/froh-06-1524364-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/645e/12336142/a85a11cb7f1d/froh-06-1524364-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/645e/12336142/6ac308f7e93c/froh-06-1524364-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/645e/12336142/c66a54bcee24/froh-06-1524364-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/645e/12336142/5102720160b5/froh-06-1524364-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/645e/12336142/a85a11cb7f1d/froh-06-1524364-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/645e/12336142/6ac308f7e93c/froh-06-1524364-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/645e/12336142/c66a54bcee24/froh-06-1524364-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/645e/12336142/5102720160b5/froh-06-1524364-g004.jpg

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本文引用的文献

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Inhibition of SUV39H1 reduces tumor angiogenesis via Notch1 in oral squamous cell carcinoma.SUV39H1 的抑制通过 Notch1 减少口腔鳞状细胞癌中的肿瘤血管生成。
PeerJ. 2024 Apr 19;12:e17222. doi: 10.7717/peerj.17222. eCollection 2024.
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Analysis of the effect of CCR7 on the microenvironment of mouse oral squamous cell carcinoma by single-cell RNA sequencing technology.单细胞 RNA 测序技术分析 CCR7 对小鼠口腔鳞状细胞癌微环境的影响。
J Exp Clin Cancer Res. 2024 Mar 27;43(1):94. doi: 10.1186/s13046-024-03013-y.
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Identification of key gene signatures and their characterization by expression correlation with drug sensitivity in smoking-associated oral squamous cell carcinoma.
鉴定与吸烟相关的口腔鳞状细胞癌的药物敏感性相关的关键基因特征及其表达相关性的特征。
J Cancer Res Ther. 2023 Oct 1;19(7):1743-1752. doi: 10.4103/jcrt.jcrt_1120_21. Epub 2022 Nov 11.
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A novel saliva-based miRNA profile to diagnose and predict oral cancer.一种新型基于唾液的 miRNA 谱,用于诊断和预测口腔癌。
Int J Oral Sci. 2024 Feb 18;16(1):14. doi: 10.1038/s41368-023-00273-w.
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Biological biomarkers of oral cancer.口腔癌的生物学标志物。
Periodontol 2000. 2024 Oct;96(1):250-280. doi: 10.1111/prd.12542. Epub 2023 Dec 10.
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Single-cell transcriptomic analysis of gingivo-buccal oral cancer reveals two dominant cellular programs.单细胞转录组分析揭示了龈颊口腔癌的两个主要细胞程序。
Cancer Sci. 2023 Dec;114(12):4732-4746. doi: 10.1111/cas.15979. Epub 2023 Oct 4.
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Total RNA sequencing reveals gene expression and microbial alterations shared by oral pre-malignant lesions and cancer.全转录组测序揭示了口腔癌前病变和癌症共有的基因表达和微生物改变。
Hum Genomics. 2023 Aug 4;17(1):72. doi: 10.1186/s40246-023-00519-y.
8
Lip and Oral Cavity Cancer Incidence and Mortality Rates Associated with Smoking and Chewing Tobacco Use and the Human Development Index in 172 Countries Worldwide: An Ecological Study 2019-2020.2019 - 2020年全球172个国家唇癌和口腔癌发病率及死亡率与吸烟、嚼烟使用及人类发展指数的关系:一项生态学研究
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