• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

整合单细胞和批量RNA测序数据以构建焦亡相关的预后特征并分析胃癌中的肿瘤微环境。

Integrating single-cell and bulk RNA sequencing data to construct a pyroptosis-related prognostic signature and analyze the tumor microenvironment in gastric cancer.

作者信息

Wang Ruiyu, Huang Shu, Wang Ping, Luo Rui, Wang Yizhou, Shi Xiaomin, Zhang Wei, Shi Lei, Zhou Xian, Tang Xiaowei

机构信息

Department of Gastroenterology, the Affiliated Hospital of Southwest Medical University, Luzhou, China.

Department of Gastroenterology, Lianshui County People's Hospital, Huai'an, China.

出版信息

Transl Cancer Res. 2025 Jul 30;14(7):4080-4099. doi: 10.21037/tcr-2024-2660. Epub 2025 Jul 25.

DOI:10.21037/tcr-2024-2660
PMID:40792135
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12335712/
Abstract

BACKGROUND

Gastric cancer (GC) is a prevalent malignancy with high morbidity and mortality. Pyroptosis, a form of programmed cell death, plays a significant role in cancer progression and immune regulation. This study aimed to construct a pyroptosis-related prognostic signature (PRPS) and analyze its association with the tumor microenvironment in GC by integrating single-cell and bulk RNA sequencing data.

METHODS

Pyroptosis-related differentially expressed genes in GC were identified by integrating single-cell and bulk RNA sequencing data. The PRPS was constructed using univariate and multivariate Cox regression analyses, and evaluated by Kaplan-Meier curves, receiver operating characteristic curves, and nomogram analysis. Subsequently, genomic variations, immune landscapes, immune checkpoint inhibitors (ICIs) responses, and drug sensitivity were evaluated in different risk subgroups.

RESULTS

We constructed a PRPS in GC by integrating single-cell and bulk RNA sequencing data. The PRPS exhibited strong predictive efficiency, with the high-risk group showing significantly lower overall survival, progression-free survival, and disease-specific survival. Multivariate Cox regression validated the PRPS as an independent prognostic factor, while the PRPS-based nomogram showed high predictive accuracy. Functional enrichment and immune landscape analysis revealed the differences between the risk subgroups in immune pathways, gene mutations, immune cell infiltration, and tumor mutational burden. Analysis of ICIs responses and drug sensitivity showed the differences in treatment among different risk subgroups, providing a basis for personalized treatment.

CONCLUSIONS

The PRPS provides a promising tool for the prognostic prediction, targeted prevention, and personalized treatment for GC, and may promote the precision medicine for GC patients.

摘要

背景

胃癌(GC)是一种发病率和死亡率都很高的常见恶性肿瘤。细胞焦亡作为一种程序性细胞死亡形式,在癌症进展和免疫调节中发挥着重要作用。本研究旨在通过整合单细胞和批量RNA测序数据,构建一种与细胞焦亡相关的预后特征(PRPS),并分析其与胃癌肿瘤微环境的关联。

方法

通过整合单细胞和批量RNA测序数据,鉴定胃癌中与细胞焦亡相关的差异表达基因。使用单变量和多变量Cox回归分析构建PRPS,并通过Kaplan-Meier曲线、受试者工作特征曲线和列线图分析进行评估。随后,在不同风险亚组中评估基因组变异、免疫图谱、免疫检查点抑制剂(ICI)反应和药物敏感性。

结果

我们通过整合单细胞和批量RNA测序数据构建了胃癌的PRPS。PRPS显示出强大的预测效率,高危组的总生存期、无进展生存期和疾病特异性生存期显著更低。多变量Cox回归验证PRPS为独立的预后因素,而基于PRPS的列线图显示出高预测准确性。功能富集和免疫图谱分析揭示了风险亚组在免疫途径、基因突变、免疫细胞浸润和肿瘤突变负担方面的差异。ICI反应和药物敏感性分析显示不同风险亚组在治疗上存在差异,为个性化治疗提供了依据。

结论

PRPS为胃癌的预后预测、靶向预防和个性化治疗提供了一个有前景的工具,并可能推动胃癌患者的精准医学发展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee4/12335712/25285f1f041e/tcr-14-07-4080-f9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee4/12335712/9c5e4682b24b/tcr-14-07-4080-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee4/12335712/4c95d46e6a10/tcr-14-07-4080-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee4/12335712/2f1f53b766c8/tcr-14-07-4080-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee4/12335712/298100c7f82c/tcr-14-07-4080-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee4/12335712/c3a4ddff46ef/tcr-14-07-4080-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee4/12335712/3ac11fbf1dd7/tcr-14-07-4080-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee4/12335712/c136681ab4a0/tcr-14-07-4080-f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee4/12335712/5a8a090bd6b3/tcr-14-07-4080-f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee4/12335712/25285f1f041e/tcr-14-07-4080-f9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee4/12335712/9c5e4682b24b/tcr-14-07-4080-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee4/12335712/4c95d46e6a10/tcr-14-07-4080-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee4/12335712/2f1f53b766c8/tcr-14-07-4080-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee4/12335712/298100c7f82c/tcr-14-07-4080-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee4/12335712/c3a4ddff46ef/tcr-14-07-4080-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee4/12335712/3ac11fbf1dd7/tcr-14-07-4080-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee4/12335712/c136681ab4a0/tcr-14-07-4080-f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee4/12335712/5a8a090bd6b3/tcr-14-07-4080-f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee4/12335712/25285f1f041e/tcr-14-07-4080-f9.jpg

相似文献

1
Integrating single-cell and bulk RNA sequencing data to construct a pyroptosis-related prognostic signature and analyze the tumor microenvironment in gastric cancer.整合单细胞和批量RNA测序数据以构建焦亡相关的预后特征并分析胃癌中的肿瘤微环境。
Transl Cancer Res. 2025 Jul 30;14(7):4080-4099. doi: 10.21037/tcr-2024-2660. Epub 2025 Jul 25.
2
A novel copper-induced cell death-related lncRNA prognostic signature associated with immune infiltration and clinical value in gastric cancer.一种新型铜诱导细胞死亡相关 lncRNA 预后标志物与胃癌免疫浸润和临床价值相关。
J Cancer Res Clin Oncol. 2023 Sep;149(12):10543-10559. doi: 10.1007/s00432-023-04916-7. Epub 2023 Jun 8.
3
Interplay between tumor mutation burden and the tumor microenvironment predicts the prognosis of pan-cancer anti-PD-1/PD-L1 therapy.肿瘤突变负荷与肿瘤微环境之间的相互作用可预测泛癌抗PD-1/PD-L1治疗的预后。
Front Immunol. 2025 Jul 24;16:1557461. doi: 10.3389/fimmu.2025.1557461. eCollection 2025.
4
Comprehensive analysis of cholesterol metabolism-related genes in prostate cancer: integrated analysis of single-cell and bulk RNA sequencing.前列腺癌中胆固醇代谢相关基因的综合分析:单细胞和批量RNA测序的整合分析
Discov Oncol. 2025 Jul 30;16(1):1442. doi: 10.1007/s12672-025-03294-5.
5
Characterization of novel anoikis-related genes as prognostic biomarkers and key determinants of the immune microenvironment in esophageal cancer.新型失巢凋亡相关基因作为食管癌预后生物标志物及免疫微环境关键决定因素的特征分析
Front Immunol. 2025 Jul 11;16:1599171. doi: 10.3389/fimmu.2025.1599171. eCollection 2025.
6
Integrated single-cell RNA sequencing analysis reveals a mesenchymal stem cell-associated signature for estimating prognosis and drug sensitivity in gastric cancer.整合单细胞 RNA 测序分析揭示了间充质干细胞相关特征,可用于评估胃癌的预后和药物敏感性。
J Cancer Res Clin Oncol. 2023 Oct;149(13):11829-11847. doi: 10.1007/s00432-023-05058-6. Epub 2023 Jul 6.
7
Construction and validation of a lipid metabolism-related genes prognostic signature for skin cutaneous melanoma.皮肤黑色素瘤脂质代谢相关基因预后特征的构建与验证
Biochem Biophys Res Commun. 2025 May 29;775:152115. doi: 10.1016/j.bbrc.2025.152115.
8
Identification of biomarkers for Laryngeal squamous cell carcinoma through Mendelian randomization and integrated bioinformatics analysis.通过孟德尔随机化和综合生物信息学分析鉴定喉鳞状细胞癌的生物标志物
Discov Oncol. 2025 Jul 18;16(1):1364. doi: 10.1007/s12672-025-03114-w.
9
Single-cell RNA sequencing technology was employed to construct a risk prediction model for genes associated with pyroptosis and ferroptosis in lung adenocarcinoma.采用单细胞RNA测序技术构建肺腺癌中与细胞焦亡和铁死亡相关基因的风险预测模型。
Respir Res. 2025 Jul 18;26(1):249. doi: 10.1186/s12931-025-03323-5.
10
Development of a prognostic model for overall survival in neuroblastoma based on Schwann cell-specific genes, clinical predictors, and MYCN amplification.基于施万细胞特异性基因、临床预测指标和MYCN扩增构建神经母细胞瘤总生存预后模型
Transl Cancer Res. 2025 May 30;14(5):2677-2689. doi: 10.21037/tcr-24-2048. Epub 2025 May 26.

本文引用的文献

1
Helicobacter pylori promotes gastric cancer progression by activating the TGF-β/Smad2/EMT pathway through HKDC1.幽门螺杆菌通过 HKDC1 激活 TGF-β/Smad2/EMT 通路促进胃癌进展。
Cell Mol Life Sci. 2024 Nov 15;81(1):453. doi: 10.1007/s00018-024-05491-x.
2
CAF-macrophage crosstalk in tumour microenvironments governs the response to immune checkpoint blockade in gastric cancer peritoneal metastases.肿瘤微环境中癌相关成纤维细胞与巨噬细胞的相互作用决定了胃癌腹膜转移对免疫检查点阻断的反应。
Gut. 2025 Feb 6;74(3):350-363. doi: 10.1136/gutjnl-2024-333617.
3
EMP3: A promising biomarker for tumor prognosis and targeted cancer therapy.
EMP3:一种有前途的肿瘤预后和靶向癌症治疗的生物标志物。
Cancer Biomark. 2024;40(3-4):227-239. doi: 10.3233/CBM-230504.
4
The crosstalk between immune cells and tumor pyroptosis: advancing cancer immunotherapy strategies.免疫细胞与肿瘤细胞焦亡的串扰:推进癌症免疫治疗策略。
J Exp Clin Cancer Res. 2024 Jul 10;43(1):190. doi: 10.1186/s13046-024-03115-7.
5
The complement regulatory protein CD46 serves as a novel biomarker for cervical cancer diagnosis and prognosis evaluation.补体调节蛋白 CD46 可作为宫颈癌诊断和预后评估的新型生物标志物。
Front Immunol. 2024 Jun 11;15:1421778. doi: 10.3389/fimmu.2024.1421778. eCollection 2024.
6
Epigenetic regulation of diverse cell death modalities in cancer: a focus on pyroptosis, ferroptosis, cuproptosis, and disulfidptosis.癌症中多种细胞死亡方式的表观遗传调控:聚焦于焦亡、铁死亡、铜死亡和二硫死亡
J Hematol Oncol. 2024 Apr 23;17(1):22. doi: 10.1186/s13045-024-01545-6.
7
International consensus on the management of metastatic gastric cancer: step by step in the foggy landscape : Bertinoro Workshop, November 2022.国际转移性胃癌管理共识:在雾霭重重的领域中步步前行:贝蒂诺罗研讨会,2022 年 11 月。
Gastric Cancer. 2024 Jul;27(4):649-671. doi: 10.1007/s10120-024-01479-5. Epub 2024 Apr 18.
8
Pyroptosis activates conventional type I dendritic cells to mediate the priming of highly functional anticancer T cells.细胞焦亡激活传统的 I 型树突状细胞,介导高功能抗肿瘤 T 细胞的激活。
J Immunother Cancer. 2024 Apr 4;12(4):e006781. doi: 10.1136/jitc-2023-006781.
9
Global cancer statistics 2022: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries.2022 年全球癌症统计数据:全球 185 个国家和地区 36 种癌症的发病率和死亡率全球估计数。
CA Cancer J Clin. 2024 May-Jun;74(3):229-263. doi: 10.3322/caac.21834. Epub 2024 Apr 4.
10
Current therapies and progress in the treatment of advanced gastric cancer.晚期胃癌的当前治疗方法及进展
Front Oncol. 2024 Feb 26;14:1327055. doi: 10.3389/fonc.2024.1327055. eCollection 2024.