• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

多组学分析确定脓毒症相关肝损伤中的免疫调节网络:实验验证与临床相关性

Multi-Omics Analysis Identifies Immune Regulatory Networks in Sepsis-Associated Liver Injury: Experimental Validation and Clinical Relevance.

作者信息

Hong Yiyu, Chen Qiutong, Xie Hua, Ma Mingliu, Gan Siting, Zhang Yuqi, Xu Zhaozhong

机构信息

Department of Emergency, Zhujiang Hospital, Southern Medical University, Guangzhou, People's Republic of China.

出版信息

J Inflamm Res. 2025 Aug 9;18:10711-10722. doi: 10.2147/JIR.S515615. eCollection 2025.

DOI:10.2147/JIR.S515615
PMID:40809463
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12348907/
Abstract

PURPOSE

Sepsis-induced liver injury (SILI) significantly contributes to mortality, yet its underlying immune mechanisms remain poorly understood. This study aimed to identify key immune-related genes (IRGs) driving T cell-mediated responses in SILI and evaluate their diagnostic potential.

METHODS

Cecal ligation and puncture (CLP) was performed to establish a murine sepsis model (n=7/group), with sham-operated controls. Serum IL-1β and lactate levels were quantified via ELISA. Public transcriptomic datasets (GSE26440, GSE26378, GSE25504, GSE28750; 180 sepsis vs 53 controls) were analyzed to identify differentially expressed IRGs (DEIRGs). Functional enrichment (GO/KEGG), protein-protein interaction (PPI) networks, and single-cell RNA sequencing (scRNA-seq) were integrated to prioritize T cell-associated genes. Flow cytometry assessed immune cell subsets (CD3+ T cells, CD19+ B cells, NK1.1+ NK cells, F4/80+ macrophages) in murine blood. Liver histopathology (HE staining) and cytokine expression (IL-1β/TNF-α; IHC) were evaluated.

RESULTS

CLP mice exhibited elevated IL-1β (P<0.01) and lactate (P<0.01), confirming metabolic dysfunction and inflammation. Bioinformatics analysis identified 19 DEIRGs, with PPI networks implicating immune regulation (PPI enrichment p=3.35×10-6). Flow cytometry confirmed T cell dominance (65.87% vs 63.85% in controls). scRNA-seq revealed four T cell-linked hub genes (FCER1G, IL2RB, PTGDR, XCL1). Protein-protein interaction (PPI) network analysis demonstrated that these genes form a synergistic regulatory network involving NF-κB, JAK-STAT, and other key pathways, with notable features including the IL2RB-XCL1 positive feedback loop and the opposing effects of PTGDR isoforms (DP1/DP2). Histopathology showed hepatic necrosis and inflammatory infiltration, correlating with upregulated IL-1β/TNF-α (IHC, P<0.05).

CONCLUSION

FCER1G, IL2RB, PTGDR, and XCL1 are novel T cell-related biomarkers of SILI, offering potential therapeutic targets. The study bridges bioinformatics predictions with experimental validation, advancing understanding of immune dysregulation in sepsis.

摘要

目的

脓毒症诱导的肝损伤(SILI)对死亡率有显著影响,但其潜在的免疫机制仍知之甚少。本研究旨在确定驱动SILI中T细胞介导反应的关键免疫相关基因(IRGs),并评估其诊断潜力。

方法

进行盲肠结扎和穿刺(CLP)以建立小鼠脓毒症模型(每组n = 7),并设假手术对照组。通过酶联免疫吸附测定(ELISA)对血清白细胞介素-1β(IL-1β)和乳酸水平进行定量。分析公开的转录组数据集(GSE26440、GSE26378、GSE25504、GSE28750;180例脓毒症患者与53例对照)以鉴定差异表达的IRGs(DEIRGs)。整合功能富集(基因本体论/京都基因与基因组百科全书,GO/KEGG)、蛋白质-蛋白质相互作用(PPI)网络和单细胞RNA测序(scRNA-seq)以对T细胞相关基因进行优先级排序。流式细胞术评估小鼠血液中的免疫细胞亚群(CD3 + T细胞、CD19 + B细胞、NK1.1 + NK细胞、F4/80 +巨噬细胞)。评估肝脏组织病理学(苏木精-伊红染色,HE染色)和细胞因子表达(IL-1β/肿瘤坏死因子-α;免疫组化,IHC)。

结果

CLP小鼠的IL-1β(P < 0.01)和乳酸(P < 0.01)水平升高,证实存在代谢功能障碍和炎症。生物信息学分析鉴定出19个DEIRGs,PPI网络涉及免疫调节(PPI富集p = 3.35×10-6)。流式细胞术证实T细胞占优势(65.87%对对照组的63.85%)。scRNA-seq揭示了四个与T细胞相关的枢纽基因(Fc片段受体IgG1,FCER1G;白细胞介素2受体β链,IL2RB;前列腺素D2受体,PTGDR;趋化因子配体1,XCL1)。蛋白质-蛋白质相互作用(PPI)网络分析表明,这些基因形成了一个涉及核因子κB(NF-κB)、Janus激酶-信号转导和转录激活因子(JAK-STAT)及其他关键途径的协同调节网络,显著特征包括IL2RB-XCL1正反馈环和PTGDR亚型(DP1/DP2)的相反作用。组织病理学显示肝坏死和炎症浸润,与IL-1β/肿瘤坏死因子-α上调相关(免疫组化,P < 0.05)。

结论

FCER1G、IL2RB、PTGDR和XCL1是SILI新的T细胞相关生物标志物,提供了潜在的治疗靶点。本研究将生物信息学预测与实验验证相结合,加深了对脓毒症中免疫失调的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2266/12348907/48ca72b11f1e/JIR-18-10711-g0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2266/12348907/e81c176ec8cd/JIR-18-10711-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2266/12348907/b88e26c3d85b/JIR-18-10711-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2266/12348907/6389b4ca7c58/JIR-18-10711-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2266/12348907/b528564d3d34/JIR-18-10711-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2266/12348907/48ca72b11f1e/JIR-18-10711-g0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2266/12348907/e81c176ec8cd/JIR-18-10711-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2266/12348907/b88e26c3d85b/JIR-18-10711-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2266/12348907/6389b4ca7c58/JIR-18-10711-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2266/12348907/b528564d3d34/JIR-18-10711-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2266/12348907/48ca72b11f1e/JIR-18-10711-g0005.jpg

相似文献

1
Multi-Omics Analysis Identifies Immune Regulatory Networks in Sepsis-Associated Liver Injury: Experimental Validation and Clinical Relevance.多组学分析确定脓毒症相关肝损伤中的免疫调节网络:实验验证与临床相关性
J Inflamm Res. 2025 Aug 9;18:10711-10722. doi: 10.2147/JIR.S515615. eCollection 2025.
2
Integrated bioinformatics and experimental analysis of mitochondrial-associated membrane function and mechanism in acute respiratory distress syndrome​​.急性呼吸窘迫综合征中线粒体相关膜功能及机制的综合生物信息学与实验分析
Sci Rep. 2025 Jul 9;15(1):24602. doi: 10.1038/s41598-025-10405-3.
3
Immune Dysregulation and Hub Gene Identification in Non-Pulmonary Sepsis-Induced Acute Lung Injury: Insights from Transcriptomic and Experimental Analyses.非肺部脓毒症诱导的急性肺损伤中的免疫失调与核心基因鉴定:转录组学和实验分析的见解
Curr Med Sci. 2025 Jul 1. doi: 10.1007/s11596-025-00083-7.
4
Identification of sepsis-associated mitochondrial genes through RNA and single-cell sequencing approaches.通过RNA和单细胞测序方法鉴定脓毒症相关的线粒体基因。
BMC Med Genomics. 2024 May 3;17(1):120. doi: 10.1186/s12920-024-01891-x.
5
Deciphering the transcriptomic characteristic of lactate metabolism and the immune infiltration landscape in abdominal aortic aneurysm.解析腹主动脉瘤中乳酸代谢的转录组特征及免疫浸润格局。
Biochem Biophys Res Commun. 2025 Jun 14;776:152198. doi: 10.1016/j.bbrc.2025.152198.
6
Construction of RNA m6A profiles in liver tissue of mice in sepsis-induced liver injury based on m6A MeRIP-seq and RNA-seq.基于m6A MeRIP-seq和RNA-seq构建脓毒症诱导肝损伤小鼠肝脏组织中的RNA m6A图谱
Eur J Med Res. 2025 Aug 8;30(1):723. doi: 10.1186/s40001-025-02985-7.
7
Metabolomics-guided analysis combined with network pharmacology and molecular simulations reveals the mechanism of JHT in treating septic intestinal dysfunction.代谢组学引导分析结合网络药理学和分子模拟揭示了健脾和胃方治疗脓毒症肠功能障碍的机制。
J Ethnopharmacol. 2025 Aug 5;353(Pt A):120300. doi: 10.1016/j.jep.2025.120300.
8
Integrated single-cell and transcriptomic analysis of bone marrow-derived metastatic neuroblastoma reveals molecular mechanisms of metabolic reprogramming.骨髓源性转移性神经母细胞瘤的单细胞与转录组学整合分析揭示代谢重编程的分子机制。
Sci Rep. 2025 Aug 5;15(1):28519. doi: 10.1038/s41598-025-13626-8.
9
Interleukin (IL)-34 promotes the inflammatory role of IL-1β-producing myeloid cells in pemphigus lesions.白细胞介素(IL)-34促进产生IL-1β的髓样细胞在天疱疮皮损中的炎症作用。
Br J Dermatol. 2025 Jul 17;193(2):287-297. doi: 10.1093/bjd/ljaf130.
10
Identifying pyroptosis- and inflammation-related genes in spinal cord injury based on bioinformatics analysis.基于生物信息学分析鉴定脊髓损伤中与焦亡和炎症相关的基因。
Sci Rep. 2025 Jul 14;15(1):25424. doi: 10.1038/s41598-025-10541-w.

本文引用的文献

1
An In-Silico Study to Identify Relevant Biomarkers in Sepsis Applying Integrated Bulk RNA Sequencing and Single-Cell RNA Sequencing Analyses.一项运用综合批量RNA测序和单细胞RNA测序分析来识别脓毒症相关生物标志物的计算机模拟研究。
Glob Chall. 2025 Mar 13;9(4):2400321. doi: 10.1002/gch2.202400321. eCollection 2025 Apr.
2
Molecular basis for chemokine recognition and activation of XCR1.XCR1 的趋化因子识别和激活的分子基础。
Proc Natl Acad Sci U S A. 2024 Nov 26;121(48):e2405732121. doi: 10.1073/pnas.2405732121. Epub 2024 Nov 20.
3
Transcriptomics analysis of differential gene expression and immune and inflammatory response mechanisms in patients with typical and non-criteria obstetric antiphospholipid syndrome (OAPS and NC-OAPS).
典型和非标准型产科抗磷脂综合征(OAPS和NC - OAPS)患者差异基因表达及免疫和炎症反应机制的转录组学分析
J Reprod Immunol. 2024 Dec;166:104389. doi: 10.1016/j.jri.2024.104389. Epub 2024 Nov 7.
4
A Self-Activating IL-15 Chimeric Cytokine Receptor to Empower Cancer Immunotherapy.一种用于增强癌症免疫治疗的自激活白细胞介素-15嵌合细胞因子受体
Immunotargets Ther. 2024 Oct 10;13:513-524. doi: 10.2147/ITT.S490498. eCollection 2024.
5
Vincamine exerts hepato-protective activity during colon ligation puncture-induced sepsis by modulating oxidative stress, apoptosis, and TNFα/Nrf-2/Keap-1 signaling pathways.长春西汀通过调节氧化应激、细胞凋亡以及 TNFα/Nrf-2/Keap-1 信号通路发挥在结扎穿刺诱导脓毒症时的肝保护作用。
Sci Rep. 2024 Aug 23;14(1):19572. doi: 10.1038/s41598-024-69729-1.
6
Development of a time-resolved fluorescence resonance energy transfer ultra-high throughput screening assay targeting SYK and FCER1G interaction.开发一种针对 SYK 和 FCER1G 相互作用的时间分辨荧光共振能量转移超高通量筛选测定法。
SLAS Discov. 2024 Sep;29(6):100177. doi: 10.1016/j.slasd.2024.100177. Epub 2024 Aug 21.
7
Medicinal evaluation and molecular docking study of osajin as an anti-inflammatory, antioxidant, and antiapoptotic agent against sepsis-associated acute kidney injury in rats.奥沙嗪作为一种抗炎、抗氧化和抗凋亡剂对大鼠脓毒症相关性急性肾损伤的药效学评价及分子对接研究。
Ren Fail. 2024 Dec;46(2):2379008. doi: 10.1080/0886022X.2024.2379008. Epub 2024 Jul 21.
8
Bridging therapy-induced phenotypes and genetic immune dysregulation to study interleukin-2-induced immunotoxicology.桥接治疗诱导表型和遗传免疫失调,以研究白细胞介素-2 诱导的免疫毒性。
Clin Immunol. 2024 Sep;266:110288. doi: 10.1016/j.clim.2024.110288. Epub 2024 Jun 29.
9
Targeting BCL9/BCL9L enhances antigen presentation by promoting conventional type 1 dendritic cell (cDC1) activation and tumor infiltration.靶向 BCL9/BCL9L 通过促进常规型 1 型树突状细胞 (cDC1) 的激活和肿瘤浸润来增强抗原呈递。
Signal Transduct Target Ther. 2024 May 29;9(1):139. doi: 10.1038/s41392-024-01838-9.
10
Evidence from Machine Learning, Diagnostic Hub Genes in Sepsis and Diagnostic Models based on Xgboost Models, Novel Molecular Models for the Diagnosis of Sepsis.机器学习证据、脓毒症诊断中心基因和基于 Xgboost 模型的诊断模型、脓毒症诊断的新型分子模型。
Curr Med Chem. 2024;31(41):6889-6901. doi: 10.2174/0109298673273009231017061448.