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模拟肿瘤复杂性:用于改进药物筛选的3D胰腺肿瘤球体模型

Simulating tumor complexity: 3D pancreatic tumor spheroid model for improved drug screening.

作者信息

Subia Bano, Patel Ankit, Nathwani Simran, Ghoshdastidar Krishnarup, Jain Mukul, Viswanathan Kasinath

机构信息

Zydus Research Centre, Zydus Life Sciences, Ahmedabad, Gujarat, 382210, India.

出版信息

Hum Cell. 2025 Aug 23;38(5):149. doi: 10.1007/s13577-025-01277-w.

DOI:10.1007/s13577-025-01277-w
PMID:40848084
Abstract

Most drug discovery studies use 2D cell cultures and animal models for screening new chemical entities (NCEs), which often leads to suboptimal results due to genetic variations, species differences, or lack of most physiological preclinical models. This is one of the most important reasons behind high rate of failure of drug candidate in the clinic, especially in oncology drug development projects. To address this issue, we developed a 3D pancreatic tumor spheroid model that better mimics the parental tumor architecture. We observed similar drug effects on cellular viability in both 2D cultures and 3D spheroids. However, cellular viability alone is insufficient to predict the translation of efficacy into clinical studies. A 3D multicellular tumor model is essential to comprehensively evaluate drug effects on the tumor microenvironment (TME), angiogenesis, and tumor biomarkers. Our model includes 3D monocellular and multicellular spheroids, which demonstrated a more relevant platform for potency evaluation. We used pancreatic ductal adenocarcinoma cells PANC-1 and PANC04.03 to conduct a comprehensive drug screening and assessed spheroid shrinkage and pre-vascularization. We also evaluated RT-qPCR analysis for gene expression of CSC markers (CD44, SOX2, KRT18), EMT markers (αSMA, vimentin) and the apoptotic marker (Annexin A1) under various conditions. Our findings highlighted the significant differences between 2D and 3D cultures, underscoring the importance of 3D multicellular models for predicting therapeutic markers and enabling comprehensive drug evaluation. In this study, MRTX1133 (a Phase I candidate of KRAS-G12D inhibitor) was used for testing our hypothesis. Treating the spheroids with MRTX1133 revealed enhanced drug response profiles compared to 2D cultures. This study underscores the critical importance of 3D multicellular model in preclinical drug screening and their potential to bridge the gap between in vitro studies and clinical outcomes.

摘要

大多数药物发现研究使用二维细胞培养和动物模型来筛选新的化学实体(NCEs),由于基因变异、物种差异或缺乏大多数生理临床前模型,这往往导致结果不理想。这是临床中候选药物高失败率背后最重要的原因之一,尤其是在肿瘤学药物开发项目中。为了解决这个问题,我们开发了一种三维胰腺肿瘤球体模型,它能更好地模拟亲本肿瘤结构。我们在二维培养和三维球体中观察到对细胞活力的类似药物作用。然而,仅细胞活力不足以预测疗效转化为临床研究的情况。三维多细胞肿瘤模型对于全面评估药物对肿瘤微环境(TME)、血管生成和肿瘤生物标志物的作用至关重要。我们的模型包括三维单细胞和多细胞球体,它们展示了一个更适合药效评估的平台。我们使用胰腺导管腺癌细胞PANC-1和PANC04.03进行全面的药物筛选,并评估球体收缩和血管前形成。我们还在各种条件下评估了RT-qPCR分析CSC标志物(CD44、SOX2、KRT18)、EMT标志物(αSMA、波形蛋白)和凋亡标志物(膜联蛋白A1)的基因表达。我们的研究结果突出了二维和三维培养之间的显著差异,强调了三维多细胞模型在预测治疗标志物和实现全面药物评估方面的重要性。在这项研究中,MRTX1133(一种KRAS-G12D抑制剂的I期候选药物)被用于检验我们的假设。用MRTX1133处理球体显示出与二维培养相比增强的药物反应谱。这项研究强调了三维多细胞模型在临床前药物筛选中的关键重要性及其弥合体外研究与临床结果之间差距的潜力。

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本文引用的文献

1
Capturing the Heterogeneity of the PDAC Tumor Microenvironment: Novel Triple Co-Culture Spheroids for Drug Screening and Angiogenic Evaluation.捕捉胰腺导管腺癌肿瘤微环境的异质性:用于药物筛选和血管生成评估的新型三重共培养球体
Cells. 2025 Mar 18;14(6):450. doi: 10.3390/cells14060450.
2
KRAS-driven pentose phosphate pathway remodeling imparts a targetable vulnerability synergizing with MRTX1133 for durable remissions in PDAC.KRAS驱动的磷酸戊糖途径重塑赋予了一种可靶向的脆弱性,与MRTX1133协同作用,可使胰腺导管腺癌实现持久缓解。
Cell Rep Med. 2025 Feb 18;6(2):101966. doi: 10.1016/j.xcrm.2025.101966.
3
Combination of farnesyl-transferase inhibition with KRAS G12D targeting breaks down therapeutic resistance in pancreatic cancer.
法尼基转移酶抑制与靶向KRAS G12D相结合可克服胰腺癌的治疗抗性。
Pathol Oncol Res. 2024 Dec 2;30:1611948. doi: 10.3389/pore.2024.1611948. eCollection 2024.
4
Multicellular tumor spheroids: A convenient in vitro model for translational cancer research.多细胞肿瘤球体:用于转化癌症研究的便利体外模型。
Life Sci. 2024 Dec 1;358:123184. doi: 10.1016/j.lfs.2024.123184. Epub 2024 Oct 28.
5
Unravelling the complexities of resistance mechanism in pancreatic cancer: Insights from in vitro and ex-vivo model systems.解析胰腺癌耐药机制的复杂性:来自体外和离体模型系统的见解
Semin Cancer Biol. 2024 Nov;106-107:217-233. doi: 10.1016/j.semcancer.2024.09.002. Epub 2024 Sep 17.
6
Drug repurposing for cancer therapy.药物重用于癌症治疗。
Signal Transduct Target Ther. 2024 Apr 19;9(1):92. doi: 10.1038/s41392-024-01808-1.
7
The Extracellular Niche and Tumor Microenvironment Enhance KRAS Inhibitor Efficacy in Pancreatic Cancer.细胞外基质微环境和肿瘤微环境增强 KRAS 抑制剂在胰腺癌中的疗效。
Cancer Res. 2024 Apr 1;84(7):1115-1132. doi: 10.1158/0008-5472.CAN-23-2504.
8
A Small Molecule with Big Impact: MRTX1133 Targets the KRASG12D Mutation in Pancreatic Cancer.小分子,大作为:MRTX1133 靶向胰腺癌中的 KRASG12D 突变。
Clin Cancer Res. 2024 Feb 16;30(4):655-662. doi: 10.1158/1078-0432.CCR-23-2098.
9
Anti-tumor efficacy of a potent and selective non-covalent KRAS inhibitor.一种强效且选择性的非共价 KRAS 抑制剂的抗肿瘤功效。
Nat Med. 2022 Oct;28(10):2171-2182. doi: 10.1038/s41591-022-02007-7. Epub 2022 Oct 10.
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Three-Dimensional In Vitro Cell Culture Models for Efficient Drug Discovery: Progress So Far and Future Prospects.用于高效药物发现的三维体外细胞培养模型:目前进展与未来展望
Pharmaceuticals (Basel). 2022 Jul 27;15(8):926. doi: 10.3390/ph15080926.