Okal Eyalira Jacob, Wu Yanfei, Iqbal Shahid, Liu Zhaorui, Hu Yuwei, Hu Na, Zhong Tingfang, Li Jingxian, Yu Dongmei, Gurung Bishal, Liu Dong, Mortimer Peter, An Shaoshan, Zhou Jie, Xu Jianchu, Gui Heng, Xing Baoshan
Department of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China; Centre for Mountain Futures (CMF), Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China; University of Chinese Academy of Sciences, Beijing 100049, China.
Department of Economic Plants and Biotechnology, Yunnan Key Laboratory for Wild Plant Resources, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China; Centre for Mountain Futures (CMF), Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China.
Bioresour Technol. 2025 Dec;437:133184. doi: 10.1016/j.biortech.2025.133184. Epub 2025 Aug 21.
Fungi are emerging as a promising solution for bioremediation. Several fungi have been identified to degrade polyester, but the specific molecular mechanisms involved remain poorly understood. In this study, we screened for polyester-degrading fungus, characterised its ability to depolymerise both polyurethane (PU) and polyethylene terephthalate (PET), and employed a multi-omics approach to identify key proteins involved in PU and PET hydrolysis. Incubation of F. vanettenii together with PU and PET films resulted in 19.70% and 6.63% mass loss, respectively. The strain colonised plastic surfaces and significantly reduced peaks for carbonyl, esters, and amides groups, and further induced stretching of methylene bonds in both plastics. LC-MS detection of the products generated identified propylene glycol, hexanoic and adipic acids from PU, while catechol and terephthalic acid were recorded from PET. Transcriptomic and proteomic analyses revealed distinct upregulation of lipases FvLIP1 and FvLIP2, signalling their role in polyester hydrolysis. RT-qPCR confirmed the upregulation of key enzymes, with FvLIP1 and FvCUT1 enriched under PU, and FvLIP2, FvCUT2, FvLAC1, and FvMCO more responsive to PET. Extracellular lipases FvLIP1 and FvLIP2 were selected for protein docking. Docking analysis revealed hydrophobic π-sigma and alkyl interactions and hydrogen bonding between amino acid residues in FvLIP1 and FvLIP2 with PU and PET. This study provides the first integrated omics-based framework for F. vanettenii, highlighting the enzymatic strategy employed by a single fungus to degrade multiple plastics.
真菌正成为生物修复领域一种很有前景的解决方案。已鉴定出几种能降解聚酯的真菌,但其中涉及的具体分子机制仍知之甚少。在本研究中,我们筛选了能降解聚酯的真菌,表征了其对聚氨酯(PU)和聚对苯二甲酸乙二酯(PET)的解聚能力,并采用多组学方法来鉴定参与PU和PET水解的关键蛋白。将范内氏镰孢菌与PU和PET薄膜一起培养,分别导致质量损失19.70%和6.63%。该菌株在塑料表面定殖,并显著降低了羰基、酯基和酰胺基的峰强度,还进一步诱导了两种塑料中亚甲基键的拉伸。对产生的产物进行液相色谱 - 质谱检测,从PU中鉴定出丙二醇、己酸和己二酸,而从PET中检测到邻苯二酚和对苯二甲酸。转录组学和蛋白质组学分析显示脂肪酶FvLIP1和FvLIP2有明显上调,表明它们在聚酯水解中发挥作用。逆转录 - 定量聚合酶链反应证实了关键酶的上调,FvLIP1和FvCUT1在PU条件下富集,而FvLIP2、FvCUT2、FvLAC1和FvMCO对PET更敏感。选择细胞外脂肪酶FvLIP1和FvLIP2进行蛋白质对接。对接分析揭示了FvLIP1和FvLIP2中的氨基酸残基与PU和PET之间存在疏水π - 西格玛和烷基相互作用以及氢键。本研究为范内氏镰孢菌提供了首个基于组学的综合框架,突出了单一真菌降解多种塑料所采用的酶策略。