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使用线粒体基因组进行的比较和系统发育分析揭示了()的基因重排。

Comparative and phylogenetic analyses using mitogenomes revealed gene re-arrangement of ().

作者信息

Wang Xianyi, Tao Jiawei, Guo Zhongyao, Wang Guoyu, Xu Guangyin, Wang Yaping, Long Yaohang, Liu Hongmei

机构信息

Engineering Research Center of Medical Biotechnology, School of Biology and Engineering, Guizhou Medical University, Guiyang, 561113, China Guizhou Medical University Guiyang China.

School of Public Health, The Key Laboratory of Environmental Pollution Monitoring and Disease Control, Ministry of Education, Guizhou Medical University, Guiyang, 561113, China Engineering Research Center of Health Medicine Biotechnology of Institution of Higher Education of Guizhou Province Guiyang China.

出版信息

IMA Fungus. 2025 Aug 15;16:e154192. doi: 10.3897/imafungus.16.154192. eCollection 2025.

Abstract

, the largest family in the order, is an ecologically and economically important group and the phylogenetic studies of this group need to be further developed. The mitogenome is an effective molecular marker for analysing phylogenetic relationships; however, mitochondrial genome (mitogenome) has been studied to a lesser extent. Thus, a comparative analysis of the mitogenomic features of seven species, representing seven distinct genera, was conducted. Phylogenetic relationships amongst these species within were reconstructed, based on the mitogenomic data. Highly consistent phylogenetic results within 34 species and two outgroups from , based on mitogenomic datasets, were obtained using Maximum Likelihood and Bayesian Inference methods. Results of phylogenetic analyses revealed that , and were polyphyletic. Interestingly, species of with different bruising discolouration patterns were found in separate clades, suggesting this trait may reflect underlying genetic divergence. Furthermore, comparative and phylogenetic analyses revealed gene re-arrangements in mitogenomes of . This study is the first to report on complete mitogenomes of four genera (, , and ) and will help better understand the phylogenetic relationships of . Furthermore, addition of more new taxa is necessary to reconstruct a high-resolution tree.

摘要

该目最大的科是一个在生态和经济方面都很重要的类群,对其进行系统发育研究仍有待进一步深入。线粒体基因组是分析系统发育关系的有效分子标记;然而,线粒体基因组(mitogenome)的研究程度相对较低。因此,我们对代表七个不同属的七种[物种名称]的线粒体基因组特征进行了比较分析。基于线粒体基因组数据,重建了该科内这些物种之间的系统发育关系。使用最大似然法和贝叶斯推断法,基于线粒体基因组数据集,在该科的34个物种和两个外群中获得了高度一致的系统发育结果。系统发育分析结果显示,[物种名称1]、[物种名称2]和[物种名称3]是多系的。有趣的是,具有不同瘀伤变色模式的[物种名称4]的物种分布在不同的分支中,这表明该性状可能反映了潜在的遗传差异。此外,比较和系统发育分析揭示了[物种名称5]线粒体基因组中的基因重排。本研究首次报道了四个属([属名1]、[属名2]、[属名3]和[属名4])的完整线粒体基因组,将有助于更好地理解[该科名称]的系统发育关系。此外,需要增加更多新的分类单元来构建高分辨率的系统发育树。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aac2/12374169/08e9d79199b0/imafungus-16-e154192-g001.jpg

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