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基因组岛在植物致病γ-变形菌致病性和进化中的作用

The Role of Genomic Islands in the Pathogenicity and Evolution of Plant-Pathogenic Gammaproteobacteria.

作者信息

Watanabe Yuta, Ishiga Yasuhiro, Sakata Nanami

机构信息

The Graduate School of Environmental, Life, Natural Science and Technology, Okayama University, 1-1-1 Tsushima-naka, Kita-ku, Okayama 700-8530, Japan.

Faculty of Life and Environmental Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba 305-8572, Japan.

出版信息

Microorganisms. 2025 Aug 1;13(8):1803. doi: 10.3390/microorganisms13081803.

DOI:10.3390/microorganisms13081803
PMID:40871307
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12388829/
Abstract

Genomic islands (GIs) including integrative and conjugative elements (ICEs), prophages, and integrative plasmids are central drivers of horizontal gene transfer in bacterial plant pathogens. These elements often carry cargo genes encoding virulence factors, antibiotic and metal resistance determinants, and metabolic functions that enhance environmental adaptability. In plant-pathogenic species such as , GIs contribute to host specificity, immune evasion, and the emergence of novel pathogenic variants. ICE and its homologs represent integrative and mobilizable elements whose tightly regulated excision and transfer are driven by a specialized transcriptional cascade, while ICEs in highlight the ecological impact of cargo genes on pathogen virulence and fitness. Pathogenicity islands further modulate virulence gene expression in response to in planta stimuli. Beyond , GIs in genera such as , , and underpin critical traits like toxin biosynthesis, secretion system acquisition, and topoisomerase-mediated stability. Leveraging high-throughput genomics and structural biology will be essential to dissect GI regulation and develop targeted interventions to curb disease spread. This review synthesizes the current understanding of GIs in plant-pathogenic gammaproteobacteria and outlines future research priorities for translating mechanistic insights into sustainable disease control strategies.

摘要

基因组岛(GIs),包括整合性接合元件(ICEs)、前噬菌体和整合质粒,是细菌植物病原体水平基因转移的核心驱动因素。这些元件通常携带编码毒力因子、抗生素和金属抗性决定因素以及增强环境适应性的代谢功能的负载基因。在诸如 等植物致病物种中,基因组岛有助于宿主特异性、免疫逃避以及新型致病变体的出现。ICE及其同源物代表整合性可移动元件,其严格调控的切除和转移由专门的转录级联驱动,而 中的ICEs突出了负载基因对病原体毒力和适应性的生态影响。致病岛进一步响应植物体内刺激调节毒力基因表达。除了 ,诸如 、 和 等属中的基因组岛支撑着毒素生物合成、分泌系统获得和拓扑异构酶介导的稳定性等关键性状。利用高通量基因组学和结构生物学对于剖析基因组岛调控以及制定针对性干预措施以遏制疾病传播至关重要。本综述综合了目前对植物致病γ-变形菌中基因组岛的理解,并概述了将机制性见解转化为可持续疾病控制策略的未来研究重点。

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Mol Plant Pathol. 2025 May;26(5):e70087. doi: 10.1111/mpp.70087.
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Genomic Biosurveillance of the Kiwifruit Pathogen Pseudomonas syringae pv. actinidiae Biovar 3 Reveals Adaptation to Selective Pressures in New Zealand Orchards.奇异果病原菌丁香假单胞菌猕猴桃致病变种3的基因组生物监测揭示了其对新西兰果园选择压力的适应性。
Mol Plant Pathol. 2025 Feb;26(2):e70056. doi: 10.1111/mpp.70056.
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, and comparative genomic analyses of pv. strains of pepper ( var. ).
辣椒褪绿斑驳病毒分离物的鉴定、全基因组序列测定和比较基因组分析。
Microbiol Spectr. 2024 Jun 4;12(6):e0006424. doi: 10.1128/spectrum.00064-24. Epub 2024 May 7.
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Rapid dissemination of host metabolism-manipulating genes via integrative and conjugative elements.整合子-接合转座子介导的宿主代谢基因的快速传播。
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