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I型分区相关蛋白通过转录激活和区域结合增强接合转移。

Type I partition-related proteins enhance conjugative transfer through transcriptional activation and region binding.

作者信息

Kishida Kouhei, Kudo Koji, Kumagai Ren, Ijima Sakura, Deng Wenhao, Stari Leonardo, Ogawa-Kishida Natsumi, Ohtsubo Yoshiyuki, Nagata Yuji, Tsuda Masataka

机构信息

Department of Molecular and Chemical Life Sciences, Graduate School of Life Sciences, Tohoku University, Sendai, Japan.

出版信息

mBio. 2025 Jul 31:e0160025. doi: 10.1128/mbio.01600-25.

DOI:10.1128/mbio.01600-25
PMID:40741764
Abstract

Plasmid partitioning and bacterial conjugation are critical processes ensuring plasmid maintenance and dissemination, respectively, within bacterial populations. Although traditionally regarded as distinct phenomena, these two processes are increasingly recognized as interconnected. While partitioning ensures plasmid inheritance during cell division, its potential influence on conjugative transfer remains poorly understood. A major impediment to understanding their interplay is that partition systems are often essential for plasmid stability, making it difficult to distinguish their direct effects on conjugation. In this study, we addressed this challenge using a mini-conjugative plasmid derived from the NAH7 plasmid. This engineered plasmid, containing all conjugation-related genes, was cloned into an -compatible vector. Additionally, the genes from NAH7 were expressed from a separate plasmid to investigate their roles in conjugative transfer. Our results revealed that the gene cluster plays a significant role in enhancing the conjugative transfer of the mini-conjugative plasmid. Specifically, ParB, a centromere-binding protein, functions as a transcriptional activator of conjugation-related genes by binding the site. In contrast, ParR, a KorA homolog, was not found to enhance transcription directly but binds extensively to the region. This binding probably facilitates the recruitment or stabilization of the relaxosome, thereby enhancing conjugation efficiency. Together, these findings unveil a previously unappreciated role for partition proteins in stimulating bacterial conjugation, providing new insights into how plasmids coordinate vertical and horizontal dissemination, highlighting that these processes can occur simultaneously within bacterial communities.IMPORTANCEPlasmid partition systems are classified into three types. While some systems have been reported to influence conjugative transfer, this study uncovers a novel mechanism utilized by a Type I system to enhance DNA transfer. Strikingly, repeat sequences perfectly matching the site-bound by ParB to activate downstream conjugative transfer genes-were identified on both plasmids and chromosomes across diverse proteobacterial taxa. Furthermore, many of these repeat sequences were localized near genes involved in conjugative transfer and partitioning, suggesting the presence of a conserved regulatory mechanism mediated by these repeats. This study provides important insights into how plasmid partition systems coordinate both vertical and horizontal dissemination. Such knowledge is essential for understanding and mitigating the spread of antibiotic resistance and other plasmid-encoded traits, and it offers a foundation for developing strategies to manage plasmid-associated genetic exchange.

摘要

质粒分配和细菌接合分别是确保质粒在细菌群体中维持和传播的关键过程。尽管传统上认为这两个过程是不同的现象,但现在越来越认识到它们是相互关联的。虽然分配确保了细胞分裂过程中质粒的遗传,但其对接合转移的潜在影响仍知之甚少。理解它们相互作用的一个主要障碍是分配系统通常对质粒稳定性至关重要,这使得难以区分它们对接合的直接影响。在本研究中,我们使用源自NAH7质粒的微型接合质粒应对了这一挑战。这个经过工程改造的质粒包含所有与接合相关的基因,被克隆到一个兼容的载体中。此外,来自NAH7的基因从一个单独的质粒表达,以研究它们在接合转移中的作用。我们的结果表明,基因簇在增强微型接合质粒的接合转移中起重要作用。具体而言,着丝粒结合蛋白ParB通过结合位点作为与接合相关基因的转录激活因子发挥作用。相比之下,KorA同源物ParR未发现直接增强转录,但广泛结合区域。这种结合可能促进松弛体的募集或稳定,从而提高接合效率。总之,这些发现揭示了分配蛋白在刺激细菌接合中以前未被认识到的作用,为质粒如何协调垂直和水平传播提供了新的见解,突出了这些过程可以在细菌群落中同时发生。重要性质粒分配系统分为三种类型。虽然已经报道一些系统会影响接合转移,但本研究揭示了I型系统用于增强DNA转移的新机制。令人惊讶的是,在不同变形菌门分类群的质粒和染色体上都鉴定出了与ParB结合以激活下游接合转移基因的位点完美匹配的重复序列。此外,许多这些重复序列位于参与接合转移和分配的基因附近,表明存在由这些重复介导的保守调控机制。本研究为质粒分配系统如何协调垂直和水平传播提供了重要见解。这些知识对于理解和减轻抗生素抗性及其他质粒编码性状的传播至关重要,并且为制定管理质粒相关基因交换的策略提供了基础。

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