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重新确立Warburg姜属(姜科)及其分子和形态界定

Reinstatement of Warb. (Zingiberaceae) and its molecular and morphological delimitation.

作者信息

Senjaya Seni Kurnia, Poulsen Axel Dalberg, Ardiyani Marlina, Cronk Quentin C B

机构信息

Department of Botany, University of British Columbia, Vancouver, BC, V6T 1Z4, Canada.

Biodiversity Research Centre, University of British Columbia, Vancouver, BC, V6T 1Z4, Canada.

出版信息

PhytoKeys. 2025 Aug 22;261:233-273. doi: 10.3897/phytokeys.261.151948. eCollection 2025.

DOI:10.3897/phytokeys.261.151948
PMID:40893574
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12397768/
Abstract

The currently polyphyletic genus Roxb. (Zingiberaceae) has over 260 species widely spread through subtropical and tropical Asia and a complex taxonomic history. This study focuses on the "Carolinensis" clade of hitherto suggested by molecular evidence. We expand on previous research through more comprehensive taxon sampling (about a fivefold increase) and morphological observation. We inferred maximum likelihood (ML) and Bayesian trees based on the nuclear ribosomal internal transcribed spacer (ITS) region, using sequences available on GenBank along with 70 newly generated sequences from this study. Our main findings are as follows: (1) ITS provides a convenient marker for separating members of this clade from other . (2) Phylogenetic reconstruction strongly supports the monophyly of the Carolinensis clade. (3) We identify four subclades with relatively distinct geographical distributions. (4) We determine that morphologically the clade is characterized by inflorescences having densely packed flowers arranged on lateral monochasial cymes, tubular bracteoles, and flowers with oblong or linear labella. (5) The clade is apparently restricted to the east of Huxley's biogeographic line. These findings support the recognition of the Carolinensis clade as a distinct genus. Warb. is the oldest valid name for this lineage, and till the present paper only includes Warb. We present a generic circumscription of the genus comprising 76 species to date placed in . In the present paper, we make 76 new combinations and designate 26 lectotypes. The eastern distribution of the clade offers insights into historical biogeographic barriers and lineage diversification. As such, represents an interesting model for exploring evolutionary and ecological processes in this region, and future phylogenomic studies will be critical for resolving remaining phylogenetic uncertainties and for deepening our understanding of the evolutionary dynamics in this unique lineage.

摘要

当前多系的罗克斯伯勒属(姜科)有260多个物种,广泛分布于亚洲亚热带和热带地区,其分类历史复杂。本研究聚焦于迄今分子证据所表明的“卡罗林ensis”分支。我们通过更全面的分类群抽样(约增加五倍)和形态观察,对先前的研究进行了拓展。我们基于核核糖体内部转录间隔区(ITS)区域,利用GenBank上的序列以及本研究新生成的70个序列,推断了最大似然(ML)树和贝叶斯树。我们的主要发现如下:(1)ITS为将该分支的成员与其他成员区分开来提供了一个便利的标记。(2)系统发育重建有力地支持了卡罗林ensis分支的单系性。(3)我们识别出四个地理分布相对不同的亚分支。(4)我们确定该分支在形态上的特征是花序上有密集排列的花,着生于侧生单歧聚伞花序上,有管状小苞片,花有长圆形或线形唇瓣。(5)该分支显然局限于赫胥黎生物地理线以东。这些发现支持将卡罗林ensis分支确认为一个独特的属。瓦尔布是该谱系最古老的有效名称,直到本文为止,仅包括瓦尔布。我们给出了该属的一个分类界定,迄今包括置于其中的76个物种。在本文中,我们进行了76个新组合并指定了26个后选模式。该分支的东部分布为历史生物地理障碍和谱系多样化提供了见解。因此,它代表了探索该地区进化和生态过程的一个有趣模型,未来的系统基因组学研究对于解决剩余的系统发育不确定性以及深化我们对这个独特谱系进化动态的理解至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/329d/12397768/199b00730a15/phytokeys-261-233_article-151948__-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/329d/12397768/df7f364a0576/phytokeys-261-233_article-151948__-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/329d/12397768/f40c3a2daffb/phytokeys-261-233_article-151948__-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/329d/12397768/97be50a6817e/phytokeys-261-233_article-151948__-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/329d/12397768/e03c5d8a62c9/phytokeys-261-233_article-151948__-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/329d/12397768/199b00730a15/phytokeys-261-233_article-151948__-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/329d/12397768/df7f364a0576/phytokeys-261-233_article-151948__-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/329d/12397768/f40c3a2daffb/phytokeys-261-233_article-151948__-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/329d/12397768/97be50a6817e/phytokeys-261-233_article-151948__-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/329d/12397768/e03c5d8a62c9/phytokeys-261-233_article-151948__-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/329d/12397768/199b00730a15/phytokeys-261-233_article-151948__-g005.jpg

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本文引用的文献

1
Phylogenomics and genome size evolution in Amomum s. s. (Zingiberaceae): Comparison of traditional and modern sequencing methods.砂仁属(姜科)的系统发育基因组学与基因组大小演化:传统测序方法与现代测序方法的比较
Mol Phylogenet Evol. 2023 Jan;178:107666. doi: 10.1016/j.ympev.2022.107666. Epub 2022 Nov 13.
2
IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era.IQ-TREE 2:基因组时代系统发育推断的新模型和有效方法。
Mol Biol Evol. 2020 May 1;37(5):1530-1534. doi: 10.1093/molbev/msaa015.
3
RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference.
RAxML-NG:用于最大似然系统发育推断的快速、可扩展和用户友好的工具。
Bioinformatics. 2019 Nov 1;35(21):4453-4455. doi: 10.1093/bioinformatics/btz305.
4
A Universal Probe Set for Targeted Sequencing of 353 Nuclear Genes from Any Flowering Plant Designed Using k-Medoids Clustering.基于 k-中值聚类设计的用于靶向测序任何开花植物中 353 个核基因的通用探针集。
Syst Biol. 2019 Jul 1;68(4):594-606. doi: 10.1093/sysbio/syy086.
5
Resolving the rapid plant radiation of early diverging lineages in the tropical Zingiberales: Pushing the limits of genomic data.解析热带姜目早期分化谱系的快速辐射:基因组数据的极限挑战。
Mol Phylogenet Evol. 2018 Nov;128:55-68. doi: 10.1016/j.ympev.2018.07.020. Epub 2018 Jul 29.
6
MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization.MAFFT 在线服务:多序列比对、交互式序列选择和可视化。
Brief Bioinform. 2019 Jul 19;20(4):1160-1166. doi: 10.1093/bib/bbx108.
7
CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.系统发育树的置信区间:一种使用自展法的方法。
Evolution. 1985 Jul;39(4):783-791. doi: 10.1111/j.1558-5646.1985.tb00420.x.
8
ModelFinder: fast model selection for accurate phylogenetic estimates.ModelFinder:用于准确系统发育估计的快速模型选择
Nat Methods. 2017 Jun;14(6):587-589. doi: 10.1038/nmeth.4285. Epub 2017 May 8.
9
Hyb-Seq: Combining target enrichment and genome skimming for plant phylogenomics.Hyb-Seq:植物系统基因组学中目标富集与基因组浅测序的结合
Appl Plant Sci. 2014 Aug 29;2(9). doi: 10.3732/apps.1400042. eCollection 2014 Sep.
10
Inflorescences: concepts, function, development and evolution.花序:概念、功能、发育与演化。
Ann Bot. 2013 Nov;112(8):1471-6. doi: 10.1093/aob/mct267.