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处女蓑蛾(斯蒂芬斯,1850年)的基因组序列。

The genome sequence of the virgin bagworm, (Stephens, 1850).

作者信息

Whiteford Samuel

机构信息

Department of Evolution, Ecology and Behaviour, University of Liverpool, Liverpool, England, UK.

出版信息

Wellcome Open Res. 2025 Feb 26;10:108. doi: 10.12688/wellcomeopenres.23768.1. eCollection 2025.

Abstract

We present a genome assembly from an individual female (the Virgin Bagworm; Arthropoda; Insecta; Lepidoptera; Psychidae). The genome sequence spans 645.30 megabases. Most of the assembly is scaffolded into 31 chromosomal pseudomolecules, including the Z sex chromosome. The mitochondrial genome has also been assembled and is 15.37 kilobases in length. Gene annotation of this assembly on Ensembl identified 12,416 protein-coding genes.

摘要

我们展示了来自一只雌性个体(蓑蛾;节肢动物门;昆虫纲;鳞翅目;蓑蛾科)的基因组组装结果。基因组序列跨度为645.30兆碱基。大部分组装序列被构建成31条染色体假分子,包括Z性染色体。线粒体基因组也已组装完成,长度为15.37千碱基。在Ensembl上对该组装结果进行的基因注释鉴定出12416个蛋白质编码基因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e651/12391867/91c447fc0009/wellcomeopenres-10-26216-g0000.jpg

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本文引用的文献

1
Identification of Parthenogenesis-Inducing Effector Proteins in Wolbachia.
Genome Biol Evol. 2024 Apr 2;16(4). doi: 10.1093/gbe/evae036.
2
MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads.
BMC Bioinformatics. 2023 Jul 18;24(1):288. doi: 10.1186/s12859-023-05385-y.
3
JBrowse 2: a modular genome browser with views of synteny and structural variation.
Genome Biol. 2023 Apr 17;24(1):74. doi: 10.1186/s13059-023-02914-z.
4
YaHS: yet another Hi-C scaffolding tool.
Bioinformatics. 2023 Jan 1;39(1). doi: 10.1093/bioinformatics/btac808.
5
Gfastats: conversion, evaluation and manipulation of genome sequences using assembly graphs.
Bioinformatics. 2022 Sep 2;38(17):4214-4216. doi: 10.1093/bioinformatics/btac460.
7
Towards complete and error-free genome assemblies of all vertebrate species.
Nature. 2021 Apr;592(7856):737-746. doi: 10.1038/s41586-021-03451-0. Epub 2021 Apr 28.
8
Twelve years of SAMtools and BCFtools.
Gigascience. 2021 Feb 16;10(2). doi: 10.1093/gigascience/giab008.
9
Haplotype-resolved de novo assembly using phased assembly graphs with hifiasm.
Nat Methods. 2021 Feb;18(2):170-175. doi: 10.1038/s41592-020-01056-5. Epub 2021 Feb 1.
10
Significantly improving the quality of genome assemblies through curation.
Gigascience. 2021 Jan 9;10(1). doi: 10.1093/gigascience/giaa153.

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