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一种用于模拟二维粘性流体中不可拉伸囊泡动力学的边界积分方法。

A boundary integral method for simulating the dynamics of inextensible vesicles suspended in a viscous fluid in 2D.

作者信息

Veerapaneni Shravan K, Gueyffier Denis, Zorin Denis, Biros George

机构信息

School of Engineering and Applied Sciences, University of Pennsylvania, Philadelphia PA 19104,

Courant Institute of Mathematical Sciences, New York University, New York 10012,

出版信息

J Comput Phys. 2009 Apr 20;228(7):2334-2353. doi: 10.1016/j.jcp.2008.11.036. Epub 2008 Dec 31.

Abstract

We present a new method for the evolution of inextensible vesicles immersed in a Stokesian fluid. We use a boundary integral formulation for the fluid that results in a set of nonlinear integro-differential equations for the vesicle dynamics. The motion of the vesicles is determined by balancing the nonlocal hydrodynamic forces with the elastic forces due to bending and tension. Numerical simulations of such vesicle motions are quite challenging. On one hand, explicit time-stepping schemes suffer from a severe stability constraint due to the stiffness related to high-order spatial derivatives and a milder constraint due to a transport-like stability condition. On the other hand, an implicit scheme can be expensive because it requires the solution of a set of nonlinear equations at each time step. We present two semi-implicit schemes that circumvent the severe stability constraints on the time step and whose computational cost per time step is comparable to that of an explicit scheme. We discretize the equations by using a spectral method in space, and a multistep third-order accurate scheme in time. We use the fast multipole method (FMM) to efficiently compute vesicle-vesicle interaction forces in a suspension with a large number of vesicles. We report results from numerical experiments that demonstrate the convergence and algorithmic complexity properties of our scheme.

摘要

我们提出了一种用于研究浸没在斯托克斯流体中的不可伸长囊泡演化的新方法。我们对流体使用边界积分公式,这导致了一组用于囊泡动力学的非线性积分 - 微分方程。囊泡的运动是通过平衡非局部流体动力与由弯曲和张力引起的弹性力来确定的。这种囊泡运动的数值模拟极具挑战性。一方面,显式时间步长方案由于与高阶空间导数相关的刚度而受到严格的稳定性约束,并且由于类似输运的稳定性条件而受到较温和的约束。另一方面,隐式方案可能成本高昂,因为它需要在每个时间步求解一组非线性方程。我们提出了两种半隐式方案,它们规避了对时间步长的严格稳定性约束,并且每个时间步的计算成本与显式方案相当。我们通过在空间中使用谱方法和在时间上使用多步三阶精确方案对方程进行离散化。我们使用快速多极子方法(FMM)在具有大量囊泡的悬浮液中有效地计算囊泡 - 囊泡相互作用力。我们报告了数值实验的结果,这些结果证明了我们方案的收敛性和算法复杂性特性。

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本文引用的文献

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Vesicle shapes from molecular dynamics simulations.分子动力学模拟得出的囊泡形状。
J Phys Chem B. 2006 Nov 16;110(45):22780-5. doi: 10.1021/jp064888a.
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Fluid Vesicles in Shear Flow.剪切流中的流体囊泡
Phys Rev Lett. 1996 Oct 21;77(17):3685-3688. doi: 10.1103/PhysRevLett.77.3685.
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Supported membranes: scientific and practical applications.支撑膜:科学与实际应用
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