Concurrent L858R and K860I mutations: PCR-negative but NGS-positive alterations that respond to inhibitors in non-small cell lung cancer.

BACKGROUND

Both amplification refractory mutation system-polymerase chain reaction (ARMS-PCR) and next-generation sequencing (NGS) are able to identify sensitizing epidermal growth factor receptor () mutations of non-small cell lung cancer (NSCLC) patients. This study aims to determine the difference between ARMS-PCR and NGS among NSCLC patients with concurrent L858R and uncommon exon 21 mutations, as well as their treatment response to EGFR tyrosine kinase inhibitors (EGFR-TKIs).

METHODS

Concurrent NGS and ARMS-PCR were performed with formalin-fixed, paraffin-embedded (FFPE) tumor tissues obtained from postoperative specimens, lung biopsy or fiberoptic bronchoscopy to identify mutations in 5,033 NSCLC cases. The clinical and pathological information of the study population was retrospectively collected from electronic clinical records at Cancer Hospital, Chinese Academy of Medical Sciences and followed up by phone calls or text messages. The mutant allele frequencies (MAFs) between L858R and uncommon exon 21 mutations were analyzed using Spearman correlation analysis and the survival information was analyzed using the Kaplan-Meier method and Log-rank tests.

RESULTS

Totally, L858R mutations were identified in 1,024 (20.3%) cases, among which 54 concurrent L858R and uncommon exon 21 mutations were identified by NGS but not ARMS-PCR. The most common concurrent pathogenic mutations in exon 21 were V834L, K860I and L833V. Of those, 23 patients received EGFR-TKIs as the first-line treatment with median progression-free survival (PFS) of 16.7 months [95% confidence interval (CI): 10.1-50.8 months], including 15 patients treated with first-generation EGFR-TKIs, 2 patients treated with second-generation EGFR-TKIs and 6 patients treated with third-generation EGFR-TKIs. Interestingly, concurrent L858R and K860I mutations were observed in 10 cases by NGS, while ARMS-PCR showed completely negative results in mutations. Of those, three patients received EGFR-TKIs as the first-line treatment, with median PFS of 11.0 months and ORR of 100.0%. Furthermore, three patients with concurrent L858R and K860I mutations identified by NGS received adjuvant targeted therapy after surgery with median disease-free survival of 10.0 months.

CONCLUSIONS

NSCLC patients with concurrent L858R and K860I mutations are able to benefit from EGFR-TKIs, which can be detected by NGS but not by ARMS-PCR. Thus, NGS should be recommended for NSCLC patients to identify driver alterations such as mutations, especially when negative results are obtained by ARMS-PCR.