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基于生物信息学的糖尿病肾病中PAN细胞焦亡相关生物标志物及免疫浸润的分析与实验验证

Bioinformatics-based analysis and experimental validation of PANoptosis-related biomarkers and immune infiltration in diabetic nephropathy.

作者信息

Zhang Su, Zhang Yun, Hu Weitao, Huang Chunyan, Zhang Yifang, Chen Xiaoqing

机构信息

The Second Clinical College of Fujian Medical University, Quanzhou, China.

Department of Rheumatology, The Second Affiliated Hospital of Fujian Medical University, Quanzhou, China.

出版信息

Front Endocrinol (Lausanne). 2025 Sep 1;16:1610882. doi: 10.3389/fendo.2025.1610882. eCollection 2025.

DOI:10.3389/fendo.2025.1610882
PMID:40958910
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12434962/
Abstract

BACKGROUND

Diabetic nephropathy (DN) is a frequent and serious microvascular complication of diabetes. PANoptosis is a novel mode of cell death that encompasses apoptosis, necrosis and pyroptosis. However, effective PANoptosis-related biomarkers for DN are currently lacking. Therefore, this study aimed to elucidate the role of PANoptosis-related genes (PRGs) in the development of DN and their potential as diagnostic markers of DN, as well as their association with immune cell infiltration.

MATERIALS AND METHODS

We retrieved the DN-related dataset GSE30122 from the GEO database. Then differentially expressed genes (DEGs) were identified and DEGs were analyzed for functional enrichment. In addition, we obtained key gene modules by WGCNA. Subsequently, we gained the intersecting genes of DEGs, key gene modules and PRGs. Four algorithms were further used to screen the key DE-PRGs in DN (DNDE-PRGs). We also investigated the biological functions of the key DNDE-PRGs by GSEA software. Furthermore, we analyzed the immune infiltration of DN tissues. The correlation of key genes with glomerular filtration rate (GFR) and blood urea nitrogen (BUN) was also examined. Finally, key genes were validated using clinical samples and db/db mice.

RESULTS

We identified two key DNDE-PRGs ( and ). They showed good diagnostic value in the DN. And they were associated with immune cell infiltration. In addition, they have a correlation with GFR and BUN. Finally, they were validated in clinical samples and animal experiments.

CONCLUSION

and may be good PANoptosis-related biomarkers in DN. This provides new insights into the pathogenesis of DN.

摘要

背景

糖尿病肾病(DN)是糖尿病常见且严重的微血管并发症。泛凋亡是一种新的细胞死亡模式,包含凋亡、坏死和焦亡。然而,目前缺乏有效的DN相关泛凋亡生物标志物。因此,本研究旨在阐明泛凋亡相关基因(PRGs)在DN发生发展中的作用及其作为DN诊断标志物的潜力,以及它们与免疫细胞浸润的关系。

材料与方法

我们从GEO数据库中检索了与DN相关的数据集GSE30122。然后鉴定差异表达基因(DEGs)并对其进行功能富集分析。此外,我们通过加权基因共表达网络分析(WGCNA)获得关键基因模块。随后,我们获得了DEGs、关键基因模块和PRGs的交集基因。进一步使用四种算法筛选DN中的关键差异表达泛凋亡相关基因(DNDE-PRGs)。我们还通过基因集富集分析(GSEA)软件研究关键DNDE-PRGs的生物学功能。此外,我们分析了DN组织的免疫浸润情况。还检测了关键基因与肾小球滤过率(GFR)和血尿素氮(BUN)的相关性。最后,使用临床样本和db/db小鼠对关键基因进行验证。

结果

我们鉴定出两个关键的DNDE-PRGs( 和 )。它们在DN中显示出良好的诊断价值。并且它们与免疫细胞浸润相关。此外,它们与GFR和BUN相关。最后,它们在临床样本和动物实验中得到验证。

结论

和 可能是DN中良好的泛凋亡相关生物标志物。这为DN的发病机制提供了新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bf36/12434962/32b593f0a94e/fendo-16-1610882-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bf36/12434962/71a95cb391cc/fendo-16-1610882-g001.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bf36/12434962/87b48f15b6d9/fendo-16-1610882-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bf36/12434962/0dc96d46ab66/fendo-16-1610882-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bf36/12434962/73e4314fba82/fendo-16-1610882-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bf36/12434962/aac636e82bfa/fendo-16-1610882-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bf36/12434962/32b593f0a94e/fendo-16-1610882-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bf36/12434962/71a95cb391cc/fendo-16-1610882-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bf36/12434962/bf74c3fc4a0d/fendo-16-1610882-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bf36/12434962/87b48f15b6d9/fendo-16-1610882-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bf36/12434962/0dc96d46ab66/fendo-16-1610882-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bf36/12434962/73e4314fba82/fendo-16-1610882-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bf36/12434962/aac636e82bfa/fendo-16-1610882-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bf36/12434962/32b593f0a94e/fendo-16-1610882-g007.jpg

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本文引用的文献

1
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Cell Death Dis. 2025 Feb 7;16(1):79. doi: 10.1038/s41419-025-07396-4.
2
Exploring the Anti-PANoptosis Mechanism of Dachaihu Decoction Against Sepsis-Induced Acute Lung Injury: Network Pharmacology, Bioinformatics, and Experimental Validation.探索大柴胡汤抗脓毒症诱导的急性肺损伤的抗泛凋亡机制:网络药理学、生物信息学及实验验证
Drug Des Devel Ther. 2025 Jan 17;19:349-368. doi: 10.2147/DDDT.S495225. eCollection 2025.
3
Genetic deficiency or pharmacological inhibition of cGAS-STING signalling suppresses kidney inflammation and fibrosis.
cGAS-STING信号通路的基因缺陷或药物抑制可抑制肾脏炎症和纤维化。
Br J Pharmacol. 2025 Apr;182(8):1741-1762. doi: 10.1111/bph.17412. Epub 2025 Jan 20.
4
Emerging role of PANoptosis in kidney diseases: molecular mechanisms and therapeutic opportunities.PAN细胞焦亡在肾脏疾病中的新作用:分子机制与治疗机遇
Apoptosis. 2025 Apr;30(3-4):579-596. doi: 10.1007/s10495-024-02072-y. Epub 2025 Jan 20.
5
SP1 activates AKT3 to facilitate the development of diabetic nephropathy.SP1激活AKT3以促进糖尿病肾病的发展。
J Endocrinol Invest. 2025 May;48(5):1269-1281. doi: 10.1007/s40618-025-02530-7. Epub 2025 Jan 9.
6
TEAD1 Prevents Necroptosis and Inflammation in Cisplatin-Induced Acute Kidney Injury Through Maintaining Mitochondrial Function.TEAD1通过维持线粒体功能预防顺铂诱导的急性肾损伤中的坏死性凋亡和炎症。
Int J Biol Sci. 2025 Jan 1;21(2):565-578. doi: 10.7150/ijbs.104335. eCollection 2025.
7
Research progress of non-coding RNA regulating the role of PANoptosis in diabetes mellitus and its complications.非编码RNA调控PAN细胞焦亡在糖尿病及其并发症中作用的研究进展
Apoptosis. 2025 Apr;30(3-4):516-536. doi: 10.1007/s10495-024-02066-w. Epub 2025 Jan 4.
8
Jinlida granules alleviate podocyte apoptosis and mitochondrial dysfunction via the AMPK/PGC‑1α pathway in diabetic nephropathy.津力达颗粒通过AMPK/PGC-1α途径减轻糖尿病肾病中的足细胞凋亡和线粒体功能障碍。
Int J Mol Med. 2025 Feb;55(2). doi: 10.3892/ijmm.2024.5467. Epub 2024 Dec 13.
9
Molecular Therapeutics for Diabetic Kidney Disease: An Update.糖尿病肾病的分子治疗:最新进展。
Int J Mol Sci. 2024 Sep 19;25(18):10051. doi: 10.3390/ijms251810051.
10
Identification of mitochondria-related genes as diagnostic biomarkers for diabetic nephropathy and their correlation with immune infiltration: New insights from bioinformatics analysis.鉴定与线粒体相关的基因作为糖尿病肾病的诊断生物标志物及其与免疫浸润的相关性:生物信息学分析的新见解。
Int Immunopharmacol. 2024 Dec 5;142(Pt A):113114. doi: 10.1016/j.intimp.2024.113114. Epub 2024 Sep 12.