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视紫红质的小分子配体及其在视网膜变性中的治疗潜力。

Small-Molecule Ligands of Rhodopsin and Their Therapeutic Potential in Retina Degeneration.

作者信息

Pashandi Zaiddodine, Jastrzebska Beata

机构信息

Department of Pharmacology, School of Medicine, Case Western Reserve University, 10900 Euclid Ave., Cleveland, OH 44106, USA.

Cleveland Center for Membrane and Structural Biology, School of Medicine, Case Western Reserve University, 10900 Euclid Ave., Cleveland, OH 44106, USA.

出版信息

Int J Mol Sci. 2025 Sep 15;26(18):8964. doi: 10.3390/ijms26188964.

Abstract

Rhodopsin, the prototypical Class A G protein-coupled receptor (GPCR) and visual pigment of rod photoreceptors, has long served as a structural and mechanistic model for GPCR biology. Mutations in rhodopsin are the leading cause of autosomal dominant retinitis pigmentosa (adRP), making this receptor a critical therapeutic target. In this review, we summarize the chemical, structural, and biophysical features of small-molecule modulators of this receptor, spanning both classical retinoid analogs and emerging non-retinoid scaffolds. These ligands reveal recurrent binding modes within the orthosteric chromophore pocket as well as peripheral allosteric and bitopic sites, where they mediate folding, rescue trafficking, photocycle modulation, and mutant stabilization. We organize ligand performance into a three-tier framework linking binding affinity, cellular rescue potency, and stability gains. Chemotypes in tier 2, which show sub-micromolar to low-micromolar activity with broad mutant coverage, emerge as promising candidates for optimization into next-generation scaffolds. Across scaffolds, a recurring minimal pharmacophore is evident by a contiguous hydrophobic π-surface anchored in the β-ionone region, coupled with a strategically oriented polar handle that modulates the Lys296/Glu113 microenvironment, offering tractable design vectors for non-retinoid chemotypes. Beyond the chromophore binding pocket, we highlight opportunities to exploit extracellular loop epitopes, cytoplasmic microswitch clefts, dimer/membrane interfaces, and ion co-binding sites to engineer safer, state-biased control with fewer photochemical liabilities. By integrating rhodopsin photobiophysics with environment-aware, multi-state medicinal chemistry, and by addressing current translational challenges in drug delivery, this review outlines a rational framework for advancing rhodopsin-targeted therapeutics toward clinically credible interventions for RP and related retinal degenerations.

摘要

视紫红质是典型的A类G蛋白偶联受体(GPCR),也是视杆光感受器的视觉色素,长期以来一直是GPCR生物学的结构和机制模型。视紫红质突变是常染色体显性视网膜色素变性(adRP)的主要原因,使该受体成为关键的治疗靶点。在本综述中,我们总结了该受体小分子调节剂的化学、结构和生物物理特性,涵盖经典类视黄醇类似物和新兴的非类视黄醇支架。这些配体揭示了在正构发色团口袋以及外周变构和双位点内的重复结合模式,它们在这些位点介导折叠、挽救运输、光循环调节和突变体稳定。我们将配体性能组织成一个三层框架,将结合亲和力、细胞挽救效力和稳定性增益联系起来。第2层的化学类型显示出亚微摩尔到低微摩尔活性,具有广泛的突变覆盖率,成为优化为下一代支架的有希望的候选物。在各种支架中,一个重复出现的最小药效团很明显,它由锚定在β-紫罗兰酮区域的连续疏水π表面以及调节Lys296/Glu113微环境的战略导向极性基团组成,为非类视黄醇化学类型提供了易于处理的设计载体。除了发色团结合口袋,我们强调了利用细胞外环表位、细胞质微开关裂隙、二聚体/膜界面和离子共结合位点来设计更安全、具有状态偏向控制且光化学负担更少的机会。通过将视紫红质光生物物理学与环境感知的多状态药物化学相结合,并解决当前药物递送中的转化挑战,本综述概述了一个合理的框架,以推动针对视紫红质的治疗方法朝着针对RP和相关视网膜变性的临床可信干预发展。

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