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通过比较基因组学、基因敲除研究以及表-斯蒂勒里辛C的全合成对斯蒂勒里辛和相关N-酰基酪氨酸的生物合成进行研究。

Investigations into the biosynthesis of stieleriacines and related N-acyl tyrosines by comparative genomics, knock-out studies and total synthesis of epi-stieleriacine C.

作者信息

Sauer Maria, Staack Myriel, Balluff Sven, Jogler Christian, Kallscheuer Nicolai, Beemelmanns Christine

机构信息

Department Antiinfectives from Microbiota, Helmholtz Institute for Pharmaceutical Research Saarland (HIPS), Saarbrücken, Germany.

Department of Microbial Interactions, Institute for Microbiology, Friedrich Schiller University, Jena, Germany.

出版信息

Commun Chem. 2025 Sep 29;8(1):283. doi: 10.1038/s42004-025-01654-4.

Abstract

N-acyl tyrosines, a prominent class of N-acyl amino acid biomolecules, are produced by selected species in at least three bacterial phyla: Pseudomonadota, Actinomycetota and Planctomycetota. Long-chain N-acyl tyrosines with a characteristic 2,3-dehydrotyrosine core structure and additional taxon-specific chemical modifications were previously reported under the names thalassotalic acids, kyonggic acids and stieleriacines. However, the underlying pathway for their biosynthesis in the different bacterial taxa remains largely unexplored. Here, we focused on the identification of biosynthetic enzymes in the two known stieleriacine-producing planctomycetal strains of the eponymous genus Stieleria. Comparative genome analyses of stieleriacine-, thalassotalic acid- and kyonggic acid producers suggest a common pathway for N-acyl dehydrotyrosine biosynthesis based on conserved genes encoding a putative adenylyltransferase/cyclase, nitroreductase and the hallmark protein N-acyl amino acid synthase (NasY). The targeted deletion of three predicted nasY genes in Stieleria neptunia indicates that one of the three encoded enzymes predominantly produces stieleriacines. We also confirmed the absolute structure of stieleriacine C by synthesis of its epimer and structural derivatives, which serve as the basis for the future investigation of the biological function of N-acyl tyrosines.

摘要

N-酰基酪氨酸是一类重要的N-酰基氨基酸生物分子,至少在三个细菌门的特定物种中产生:假单胞菌门、放线菌门和浮霉菌门。以前曾报道过具有特征性2,3-脱氢酪氨酸核心结构以及其他特定分类群化学修饰的长链N-酰基酪氨酸,其名称分别为thalassotalic酸、kyonggic酸和stieleriacine。然而,它们在不同细菌分类群中的生物合成潜在途径在很大程度上仍未被探索。在此,我们专注于鉴定两种已知的产生stieleriacine的浮霉菌属菌株中参与生物合成的酶。对产生stieleriacine、thalassotalic酸和kyonggic酸的菌株进行比较基因组分析表明,基于编码假定腺苷酸转移酶/环化酶、硝基还原酶和标志性蛋白N-酰基氨基酸合酶(NasY)的保守基因,N-酰基脱氢酪氨酸生物合成存在一条共同途径。对海王星浮霉菌中三个预测的nasY基因进行靶向缺失表明,三种编码酶中的一种主要产生stieleriacine。我们还通过合成其差向异构体和结构衍生物确定了stieleriacine C的绝对结构,这为未来研究N-酰基酪氨酸的生物学功能奠定了基础。

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