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脉冲辐解和电子顺磁共振研究超氧化物歧化酶的作用机制。证据表明只有一半的活性位点参与催化作用。

Mechanism of action of superoxide dismutase from pulse radiolysis and electron paramagnetic resonance. Evidence that only half the active sites function in catalysis.

作者信息

Fielden E M, Roberts P B, Bray R C, Lowe D J, Mautner G N, Rotilio G, Calabrese L

出版信息

Biochem J. 1974 Apr;139(1):49-60. doi: 10.1042/bj1390049.

DOI:10.1042/bj1390049
PMID:4377100
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1166250/
Abstract
  1. Detailed studies on the mechanism of the enzymic reaction of bovine superoxide dismutase were carried out by using pulse radiolysis and electron paramagnetic resonance (e.p.r.). 2. The second-order rate constant for reaction between superoxide dismutase and the superoxide ion was redetermined as (2.37+/-0.18)x10(9)m(-1).s(-1) at 25 degrees C. This reaction governs the turnover, and any first-order steps must have rate constants higher than about 10(6)s(-1). Turnover has a low activation energy and is slowed substantially when the viscosity is increased with glycerol, confirming that the reaction rate is near the limit for diffusion control. In water a reversible conformation change to a less active form appears to take place above about 40 degrees C. 3. Pre-steady-state rates of reduction and reoxidation of copper in the enzyme are consistent with these processes being rate-limiting in enzyme turnover. 4. Examination, with the help of computer simulation, of the e.p.r. spectra at 9 and 35GHz of native superoxide dismutase indicated that, apart from 10-20% of impurities, only one species of Cu(2+) is distinguishable. Further, the specific activity of our enzyme preparations, measured by pulse radiolysis, is at least as high as that obtained by other workers. 5. Nevertheless, measurement of the proportion of copper present as Cu(2+) (determined both optically and by e.p.r. spectroscopy) in the steady states approached from both the oxidized and the reduced forms of the enzyme, indicates (after allowing for the impurities) that only half of the copper atoms participate in turnover. E.p.r. spectroscopy provided no evidence for differences between functioning and non-functioning Cu(2+) atoms. 6. It is suggested that the results may be best interpreted in terms of an allosteric type of mechanism, with two initially indistinguishable copper atoms in the enzyme. Reaction of one of these with a superoxide ion then renders the other, at least transiently, unreactive.
摘要
  1. 运用脉冲辐解和电子顺磁共振(e.p.r.)技术,对牛超氧化物歧化酶的酶促反应机制进行了详细研究。2. 超氧化物歧化酶与超氧离子反应的二级速率常数在25℃时重新测定为(2.37±0.18)×10⁹ m⁻¹·s⁻¹。该反应决定了周转数,任何一级步骤的速率常数必须高于约10⁶ s⁻¹。周转具有低活化能,当用甘油增加粘度时,周转显著减慢,这证实反应速率接近扩散控制的极限。在水中,温度高于约40℃时,似乎会发生可逆的构象变化,转变为活性较低的形式。3. 酶中铜的预稳态还原和再氧化速率与这些过程是酶周转的限速步骤一致。4. 通过计算机模拟对天然超氧化物歧化酶在9和35GHz下的e.p.r.光谱进行检查表明,除了10 - 20%的杂质外,只能区分一种Cu(²⁺)。此外,通过脉冲辐解测量的我们酶制剂的比活性至少与其他研究者获得的比活性一样高。5. 然而,从酶氧化态和还原态接近稳态时,通过光学和e.p.r.光谱法测定以Cu(²⁺)形式存在的铜的比例(考虑杂质后)表明,只有一半的铜原子参与周转。e.p.r.光谱法没有提供功能型和非功能型Cu(²⁺)原子之间存在差异的证据。6. 有人认为,这些结果最好用变构类型的机制来解释,酶中有两个最初无法区分的铜原子。其中一个与超氧离子反应后,会使另一个至少暂时失去反应活性。
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6455/1166250/67d3eb60d839/biochemj00585-0069-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6455/1166250/d11436f1dda0/biochemj00585-0064-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6455/1166250/be0a4c108325/biochemj00585-0067-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6455/1166250/67d3eb60d839/biochemj00585-0069-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6455/1166250/d11436f1dda0/biochemj00585-0064-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6455/1166250/be0a4c108325/biochemj00585-0067-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6455/1166250/67d3eb60d839/biochemj00585-0069-a.jpg

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