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进化速率真的是可变的吗?

Are evolutionary rates really variable?

作者信息

Gillespie J H, Langley C H

出版信息

J Mol Evol. 1979 Jun 8;13(1):27-34. doi: 10.1007/BF01732751.

Abstract

Langley and Fitch (1974, 1976) have shown that the pattern of nucleotide substitutions in proteins is inconsistent with a Poisson process with constant rate. From this they conclude that the rate is temporally heterogeneous. It is pointed out in this note that a process which is temporally homogeneous but not a Poisson process is compatible with the data if the coefficient of variation of the time between substitutions is around 1.63. Furthermore, theoretical analysis of samples from neutral phylogenies shows that these samples should not appear to be samples from a Poisson process, but should deviate from a Poisson process in the same direction, though perhaps not to the same extent, as do the data.

摘要

兰利和菲奇(1974年、1976年)已表明,蛋白质中核苷酸替代的模式与具有恒定速率的泊松过程不一致。由此他们得出结论,速率在时间上是异质的。本注释指出,如果替代之间时间的变异系数约为1.63,那么一个时间上同质但不是泊松过程的过程与数据是兼容的。此外,对中性系统发育样本的理论分析表明,这些样本不应看起来像是来自泊松过程的样本,而应与数据一样,在相同方向上偏离泊松过程,尽管程度可能不同。

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