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通过同位素标记研究溶液中的转运RNA构象。

Transfer RNA conformation in solution investigated by isotope labeling.

作者信息

Gamble R C, Schimmel P R

出版信息

Proc Natl Acad Sci U S A. 1974 Apr;71(4):1356-60. doi: 10.1073/pnas.71.4.1356.

DOI:10.1073/pnas.71.4.1356
PMID:4598301
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC388227/
Abstract

The incorporation of tritium into the C-8 position of purine residues in yeast tRNA(Phe) is shown to be markedly dependent on the conformation of the molecule. The completely unfolded molecule incorporates tritium at a rate commensurate to that expected for free purine nucleotides, but partially or completely folded forms incorporate proportionately less. The labeling of specific purine sites is determined by digesting the nucleic acid with a specific nuclease and analyzing each of the radioactive fragments produced. This analysis reveals that the amount of labeling of a purine in the folded form is strongly dependent upon its position in the sequence, whereas purine labeling in the unfolded form is independent of sequence position. The labeling pattern of the different bases in the folded form agrees fairly well with what is expected, based on existing solution and x-ray data on the conformation, i.e., residues involved in helical sections or apparently masked by tertiary interactions label more slowly than those on the "outside" of the molecule. Finally, folding and unfolding of specific regions of the macromolecule may be followed by the isotope labeling.

摘要

氚掺入酵母苯丙氨酸转运核糖核酸(tRNA(Phe))嘌呤残基的C-8位置,结果表明这明显取决于分子的构象。完全展开的分子以与游离嘌呤核苷酸预期速率相当的速度掺入氚,但部分或完全折叠的形式掺入比例相对较少。通过用特定核酸酶消化核酸并分析产生的每个放射性片段来确定特定嘌呤位点的标记。该分析表明,折叠形式中嘌呤的标记量强烈取决于其在序列中的位置,而未折叠形式中的嘌呤标记与序列位置无关。基于现有的关于构象的溶液和X射线数据,折叠形式中不同碱基的标记模式与预期相当吻合,即参与螺旋部分或明显被三级相互作用掩盖的残基比分子“外部”的残基标记得更慢。最后,大分子特定区域的折叠和展开可以通过同位素标记来追踪。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd6f/388227/661a358534a4/pnas00057-0353-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd6f/388227/661a358534a4/pnas00057-0353-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd6f/388227/661a358534a4/pnas00057-0353-a.jpg

相似文献

1
Transfer RNA conformation in solution investigated by isotope labeling.通过同位素标记研究溶液中的转运RNA构象。
Proc Natl Acad Sci U S A. 1974 Apr;71(4):1356-60. doi: 10.1073/pnas.71.4.1356.
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10
The selective iodination of yeast phenylalanine transfer RNA with 125-I.
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本文引用的文献

1
A HYDROGEN EXCHANGE METHOD USING TRITIUM AND SEPHADEX: ITS APPLICATION TO RIBONUCLEASE.一种使用氚和葡聚糖凝胶的氢交换方法:其在核糖核酸酶中的应用。
Biochemistry. 1963 Jul-Aug;2:798-807. doi: 10.1021/bi00904a030.
2
Complementary trimer binding to transfer RNA(Phe).
FEBS Lett. 1971 Sep 1;16(4):275-277. doi: 10.1016/0014-5793(71)80368-x.
3
Chemical modification of yeast alanine-tRNA with a radioactive carbodiimide.
Science. 1967 Nov 3;158(3801):666-9. doi: 10.1126/science.158.3801.666.
4
A proton exchange between purines and water and its application to biochemistry.嘌呤与水之间的质子交换及其在生物化学中的应用。
Biochemistry. 1967 Sep;6(9):2735-9. doi: 10.1021/bi00861a013.
5
A study of polyadenylic acid at neutral pH.在中性pH值下对聚腺苷酸的一项研究。
J Mol Biol. 1966 Feb;15(2):455-66. doi: 10.1016/s0022-2836(66)80121-3.
6
Cooperative interactions in single-strand oligomers of adenylic acid.腺苷酸单链寡聚物中的协同相互作用。
Biopolymers. 1966;4(2):223-35. doi: 10.1002/bip.1966.360040209.
7
Modification of nucleosides and nucleotides. 8. The reaction rates of pseudouridine residues with acrylonitrile and its relation to the secondary structure of transfer ribonucleic acid.
Biochim Biophys Acta. 1968 May 21;157(3):466-75.
8
Studies on polynucleotides. LXXXII. Yeast phenylalanine transfer ribonucleic acid: partial digestion with ribonuclease T-1 and derivation of the total primary structure.多核苷酸研究。八十二。酵母苯丙氨酸转移核糖核酸:核糖核酸酶T-1的部分消化及完整一级结构的推导
J Biol Chem. 1968 Feb 10;243(3):598-608.
9
Complementary oligonucleotide binding to the anticodon loop of fMet-transfer RNA.与甲酰甲硫氨酸转运RNA反密码子环结合的互补寡核苷酸。
Nature. 1970 Feb 7;225(5232):508-10. doi: 10.1038/225508a0.
10
In vitro incorporation of tritium into native DNA.氚在体外掺入天然DNA。
Biopolymers. 1969;8(6):733-41. doi: 10.1002/bip.1969.360080604.