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棘皮动物门的基因组结构与核苷酸序列差异

Genome structure and divergence of nucleotide sequences in echinodermata.

作者信息

Brykov V A, Volfson V G, Vorob'ev V I

出版信息

Chromosoma. 1979 Sep 1;74(1):105-24. doi: 10.1007/BF00344486.

DOI:10.1007/BF00344486
PMID:510077
Abstract

The arrangement of repetitive and single-copy DNA sequences has been studied in DNA of some species of Echinodermata--sea urchin, starfishes and sea-cucumber. Comparison of the reassociation kinetics of short and long DNA fragments indicates that the pattern of DNA sequence organization of all these species is similar to the so-called "Xenopus pattern" characteristic of the genomes of most animals and plants. However, substantional variations have been found in the amount of repetitive nucleotide sequences in DNA of different species and in the length of DNA regions containing adjacent single-copy and repetitive sequences. Measurements of the size of S1-nuclease resistant reassociated repetitive DNA sequences show a variability of ratios between long and short repetitive DNA sequences of different species.--The degree of divergence of short and long repetitive DNA sequences and single-copy DNA was studied by molecular hybridization of the sea urchin Strongylocentrotus intermedius 3H-DNA with the DNA of other species and by determination of the thermostability of the hybridized molecules so obtained. All three fractions of S. intermedius DNA contain sequences homologous to DNA of the other echinoderm species studied. The results obtained suggest that short repetitive DNA sequences are those which have been most highly conserved throughout the evolution of Echinodermata. A new hypothesis is proposed to explain the nature of the evolutionary changes in DNA sequence interspersion patterns.

摘要

已对一些棘皮动物(海胆、海星和海参)的DNA中重复和单拷贝DNA序列的排列进行了研究。短DNA片段和长DNA片段重新缔合动力学的比较表明,所有这些物种的DNA序列组织模式类似于大多数动植物基因组所特有的所谓“非洲爪蟾模式”。然而,已发现不同物种DNA中重复核苷酸序列的数量以及包含相邻单拷贝和重复序列的DNA区域的长度存在实质性差异。对S1核酸酶抗性重新缔合的重复DNA序列大小的测量显示,不同物种的长重复DNA序列和短重复DNA序列之间的比例存在变异性。——通过中间球海胆3H-DNA与其他物种的DNA进行分子杂交,并通过测定由此获得的杂交分子的热稳定性,研究了短重复DNA序列、长重复DNA序列和单拷贝DNA的分歧程度。中间球海胆DNA的所有三个部分都含有与所研究的其他棘皮动物物种的DNA同源的序列。所得结果表明,短重复DNA序列是在棘皮动物整个进化过程中最保守的序列。提出了一个新的假说来解释DNA序列散布模式进化变化的本质。

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Genome structure and divergence of nucleotide sequences in echinodermata.棘皮动物门的基因组结构与核苷酸序列差异
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[Single copy and repetitive nucleotide sequences in the genome of Echinodermata. II. Nucleotide sequence divergence of DNA of echinoderms].[棘皮动物基因组中的单拷贝和重复核苷酸序列。II. 棘皮动物DNA的核苷酸序列差异]
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引用本文的文献

1
Single copy DNA homology in sea stars.海星中的单拷贝DNA同源性。
J Mol Evol. 1982;18(2):92-101. doi: 10.1007/BF01810827.
2
Conservation of repetitive DNA sequences in deer species studied by southern blot transfer.通过Southern印迹转移研究鹿科物种中重复DNA序列的保守性。
J Mol Evol. 1984;20(1):17-24. doi: 10.1007/BF02101981.

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A MOLECULAR APPROACH IN THE SYSTEMATICS OF HIGHER ORGANISMS. DNA INTERACTIONS PROVIDE A BASIS FOR DETECTING COMMON POLYNUCLEOTIDE SEQUENCES AMONG DIVERSE ORGANISMS.高等生物系统学中的分子方法。DNA相互作用为检测不同生物间的共同多核苷酸序列提供了基础。
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Characterization of macromolecules by constant velocity sedimentation.通过等速沉降法对大分子进行表征。
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Gene regulation for higher cells: a theory.高等细胞的基因调控:一种理论
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Analysis of repeating DNA sequences by reassociation.通过重缔合分析重复DNA序列。
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General interspersion of repetitive with non-repetitive sequence elements in the DNA of Xenopus.非洲爪蟾DNA中重复序列元件与非重复序列元件的总体散布情况。
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Related satellite DNA's in the genus Mus.小家鼠属中的相关卫星DNA
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Relative stabilities of RNA/DNA hybrids: effect of RNA chain length in competitive hybrization.RNA/DNA杂交体的相对稳定性:RNA链长度在竞争性杂交中的影响
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Distribution of repetitive and non-repetitive nucleotide sequences in the DNA of sea urchin.海胆DNA中重复和非重复核苷酸序列的分布
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