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蛋白质生物合成中的问题。

Problems in protein biosynthesis.

作者信息

Lengyel P

出版信息

J Gen Physiol. 1966 Jul;49(6):305-30. doi: 10.1085/jgp.49.6.305.

Abstract

Outline of the steps in protein synthesis. Nature of the genetic code. The use of synthetic oligo- and polynucleotides in deciphering the code. Structure of the code: relatedness of synonym codons. The wobble hypothesis. Chain initiation and N-formyl-methionine. Chain termination and nonsense codons. Mistakes in translation: ambiguity in vitro. Suppressor mutations resulting in ambiguity. Limitations in the universality of the code. Attempts to determine the particular codons used by a species. Mechanisms of suppression, caused by (a) abnormal aminoacyl-tRNA, (b) ribosomal malfunction. Effect of streptomycin. The problem of "reading" a nucleic acid template. Different ribosomal mutants and DNA polymerase mutants might cause different mistakes. The possibility of involvement of allosteric proteins in template reading.

摘要

蛋白质合成步骤概述。遗传密码的性质。合成寡核苷酸和多核苷酸在破译密码中的应用。密码结构:同义密码子的相关性。摆动假说。链起始与N-甲酰甲硫氨酸。链终止与无义密码子。翻译中的错误:体外的模糊性。导致模糊性的抑制基因突变。密码通用性的局限性。确定一个物种所使用的特定密码子的尝试。由(a)异常氨酰tRNA、(b)核糖体功能异常引起的抑制机制。链霉素的作用。“读取”核酸模板的问题。不同的核糖体突变体和DNA聚合酶突变体可能导致不同的错误。变构蛋白参与模板读取的可能性。

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本文引用的文献

2
Suppression in vitro: Identification of a Serine-sRNA as a "Nonsense" Suppressor.
Science. 1965 Jul 23;149(3682):417-22. doi: 10.1126/science.149.3682.417.
3
THE ENZYMATIC SYNTHESIS OF RNA: NEAREST-NEIGHBOR BASE FREQUENCIES.
Proc Natl Acad Sci U S A. 1961 Sep;47(9):1400-5. doi: 10.1073/pnas.47.9.1400.
4
AMBIVALENT rII MUTANTS OF PHAGE T4.
Proc Natl Acad Sci U S A. 1961 Jul;47(7):1025-38. doi: 10.1073/pnas.47.7.1025.
5
FORMATION OF THE PEPTIDE CHAIN OF HEMOGLOBIN.
Proc Natl Acad Sci U S A. 1960 Aug;46(8):1030-8. doi: 10.1073/pnas.46.8.1030.
6
THE AMINO ACID COMPOSITION AND C-TERMINAL SEQUENCE OF A CHEMICALLY EVOKED MUTANT OF TMV.
Proc Natl Acad Sci U S A. 1960 May;46(5):636-42. doi: 10.1073/pnas.46.5.636.
7
The dependence of cell-free protein synthesis in E. coli upon naturally occurring or synthetic polyribonucleotides.
Proc Natl Acad Sci U S A. 1961 Oct 15;47(10):1588-602. doi: 10.1073/pnas.47.10.1588.
8
Characteristics and composition of RNA coding units.
Proc Natl Acad Sci U S A. 1962 Apr 15;48(4):666-77. doi: 10.1073/pnas.48.4.666.
9
Synthetic polynucleotides and the amino acid code.
Proc Natl Acad Sci U S A. 1961 Dec 15;47(12):1936-42. doi: 10.1073/pnas.47.12.1936.
10
The production of phage chromosome fragments and their capacity for genetic transfer.
J Mol Biol. 1962 Apr;4:275-87. doi: 10.1016/s0022-2836(62)80005-9.

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