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氨基酸序列对蛋白质结构的影响。

The influence of amino-acid sequence on protein structure.

作者信息

Guzzo A V

出版信息

Biophys J. 1965 Nov;5(6):809-22. doi: 10.1016/S0006-3495(65)86753-4.

DOI:10.1016/S0006-3495(65)86753-4
PMID:5884309
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1367904/
Abstract

On the basis of the known sequences and structures of myoglobin, and alpha and beta hemoglobin, a possible correlation between certain amino acids in the sequence and the location of the helical and non-helical parts of the structure is suggested. The presence in the sequence of four critical groups; proline, aspartic acid, glutamic acid, or histidine appears to be necessary (although the last three are not sufficient) for a helical disruption to form. Additional support for this correlation is obtained from analyses of proline replacement in mutant and variant proteins. A mechanism based on hydrophobic bonding is proposed as a rationale for the apparent behavior of these groups. On the basis of these rules and correlations, secondary structures can be proposed for lysozyme and tobacco mosaic virus protein which are consistent with several pieces of evidence.

摘要

基于已知的肌红蛋白、α和β血红蛋白的序列和结构,有人提出序列中的某些氨基酸与结构中螺旋和非螺旋部分的位置之间可能存在关联。序列中存在四个关键基团:脯氨酸、天冬氨酸、谷氨酸或组氨酸,似乎是形成螺旋破坏所必需的(尽管后三个并不充分)。对突变体和变体蛋白中脯氨酸替代的分析为这种关联提供了额外支持。有人提出一种基于疏水键合的机制,作为这些基团明显行为的理论依据。基于这些规则和关联,可以为溶菌酶和烟草花叶病毒蛋白提出二级结构,这与几条证据是一致的。

相似文献

1
The influence of amino-acid sequence on protein structure.氨基酸序列对蛋白质结构的影响。
Biophys J. 1965 Nov;5(6):809-22. doi: 10.1016/S0006-3495(65)86753-4.
2
Conformation of polypeptide chains.多肽链的构象
Annu Rev Biochem. 1969;38:45-82. doi: 10.1146/annurev.bi.38.070169.000401.
3
A model of alpha-helical distribution in proteins.蛋白质中α-螺旋分布的模型。
Biophys J. 1968 Nov;8(11):1236-55. doi: 10.1016/S0006-3495(68)86553-1.
4
On the theoretical prediction of protein antigenic determinants from amino acid sequences.基于氨基酸序列对蛋白质抗原决定簇的理论预测
Biomed Biochim Acta. 1987;46(11):855-66.
5
Correlation of amino acid sequence and conformation in tobacco mosaic virus.烟草花叶病毒中氨基酸序列与构象的相关性
Biophys J. 1968 Jan;8(1):29-39. doi: 10.1016/S0006-3495(68)86472-0.
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Use of helical wheels to represent the structures of proteins and to identify segments with helical potential.使用螺旋轮来表示蛋白质的结构并识别具有螺旋潜力的片段。
Biophys J. 1967 Mar;7(2):121-35. doi: 10.1016/S0006-3495(67)86579-2.
7
An attempt to locate the non-helical and permissively helical sequences of proteins: application to the variable regions of immunoglobulin light and heavy chains.定位蛋白质非螺旋和允许螺旋序列的尝试:应用于免疫球蛋白轻链和重链的可变区
Proc Natl Acad Sci U S A. 1971 Jul;68(7):1501-6. doi: 10.1073/pnas.68.7.1501.
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[Further studies on amino acid sequence of proteins in tobacco mosaic virus].[烟草花叶病毒中蛋白质氨基酸序列的进一步研究]
Z Naturforsch B. 1965 Dec;20(12):1203-13.
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The influence of tertiary structure upon the optical activity of three globular proteins: myoglobin, hemoglobin and lysozyme.三级结构对三种球状蛋白质(肌红蛋白、血红蛋白和溶菌酶)光学活性的影响。
Eur J Biochem. 1969 Dec;11(2):201-12.
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[Relation of the secondary structure of globular proteins to their primary structure].[球状蛋白质的二级结构与其一级结构的关系]
Biofizika. 1970 Sep-Oct;15(5):757-68.

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本文引用的文献

1
Reactivation and hybridization of reduced alkaline phosphatase.还原碱性磷酸酶的再激活与杂交
Proc Natl Acad Sci U S A. 1962 Jul 15;48(7):1230-7. doi: 10.1073/pnas.48.7.1230.
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THE HEMOGLOBINS.血红蛋白
Adv Protein Chem. 1964;19:1-71. doi: 10.1016/s0065-3233(08)60188-6.
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A CORRELATION BETWEEN AMINO ACID COMPOSITION AND PROTEIN STRUCTURE.氨基酸组成与蛋白质结构之间的相关性。
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4
RECENT STUDIES ON THE STRUCTURE OF TOBACCO MOSAIC VIRUS.烟草花叶病毒结构的近期研究
Adv Protein Chem. 1963;18:1-35. doi: 10.1016/s0065-3233(08)60267-3.
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Structure of hen egg-white lysozyme. A three-dimensional Fourier synthesis at 2 Angstrom resolution.鸡蛋清溶菌酶的结构。2埃分辨率下的三维傅里叶合成。
Nature. 1965 May 22;206(4986):757-61. doi: 10.1038/206757a0.