Rendina A R, Hermes J D, Cleland W W
Biochemistry. 1984 Oct 23;23(22):5148-56. doi: 10.1021/bi00317a011.
A method has been developed for calculating rate constants for dehydration of aldehydes that induce ATPase reactions by kinases and where 18O is transferred from the aldehyde or its hydrate to inorganic phosphate during the reaction. The method involves measurement of the fraction of 18O in phosphate by 31P NMR after the ATPase reaction has proceeded for several minutes with zero-order kinetics. The reaction is started by addition of the aldehyde in a small volume of H2 18O, and the speed of washout of 18O by reversible dehydration relative to the rate of the ATPase reaction allows calculation of the rate constants if the hydration equilibrium constant is known from the proton NMR spectrum of the aldehyde. Dehydration rate constants (s-1 at pH 8-8.5, 0.1 M buffer, 25 degrees C) for the following aldehydes (all over 95% hydrated) and kinases used are as follows: D-glyceraldehyde with glycerokinase, 0.03; 2,5-anhydro-D-mannose 6-phosphate with fructose-6-phosphate kinase, 0.025; 2,5-anhydro-D-mannose or 2,5-anhydro-D-talose with fructokinase, 0.029 and 0.017, respectively; D-gluco-hexodialdose with hexokinase, 0.068. With betaine aldehyde and choline kinase or glyoxylate and pyruvate kinase, no 18O was transferred to phosphate during the ATPase reactions. However, the dehydration rate constant for glyoxylate (0.007 s-1 at pH 7 extrapolated to zero buffer concentration and up to 0.11 s-1 at pH 9.0 with 0.3 M buffer) was determined by extrapolating the initial rate of reduction of the free aldehyde catalyzed by lactate dehydrogenase to infinite enzyme levels.(ABSTRACT TRUNCATED AT 250 WORDS)
已开发出一种方法,用于计算醛脱水的速率常数。这些醛通过激酶引发ATP酶反应,且在反应过程中18O从醛或其水合物转移至无机磷酸盐。该方法涉及在ATP酶反应以零级动力学进行几分钟后,通过31P NMR测量磷酸盐中18O的比例。反应通过在少量H2 18O中加入醛来启动,如果从醛的质子NMR光谱中已知水合平衡常数,那么相对于ATP酶反应速率,18O通过可逆脱水的洗脱速度可用于计算速率常数。以下醛(均超过95%水合)和所用激酶的脱水速率常数(pH 8 - 8.5、0.1 M缓冲液、25℃下的s-1)如下:D-甘油醛与甘油激酶,0.03;2,5-脱水-D-甘露糖6-磷酸与果糖-6-磷酸激酶,0.025;2,5-脱水-D-甘露糖或2,5-脱水-D-塔罗糖与果糖激酶,分别为0.029和0.017;D-葡萄糖己二醛与己糖激酶,0.068。对于甜菜碱醛与胆碱激酶或乙醛酸与丙酮酸激酶,在ATP酶反应过程中没有18O转移至磷酸盐。然而,乙醛酸的脱水速率常数(pH 7下外推至零缓冲液浓度时为0.007 s-1,在pH 9.0、0.3 M缓冲液时高达0.11 s-1)是通过将乳酸脱氢酶催化的游离醛还原初始速率外推至无限酶水平来确定的。(摘要截短于250字)